CF838504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838504 vs. ExPASy Swiss-Prot
Match: CLCF_ARATH (Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F PE=2 SV=2) HSP 1 Score: 281.182 bits (718), Expect = 4.613e-75 Identity = 156/288 (54.17%), Postives = 186/288 (64.58%), Query Frame = 2 Query: 35 SDERRPLRSSNQEDL-----ESAPDSPSNRTSTPSAAGGIKDLFKQLDRRFS--DRRITFK------------DPPLSHSRSSSFDH--------HNYVDARDS-------LTESAPPEWXXXXXXXXXXXXXXXXVAFFNKGVHIIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILNQIKQSSSLDRQGFDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERKIXXXXXXXXXXXXXXXXXXVAGCFF 796 +++R LRS++ +++ E D S + S AGG++DLFK +DRRFS RR++FK +P S + S++ + H+ D D L +SAPPEW VA FNKGVH+IHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEIL+QI+QS+S RQG D +AG++P IKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGF+LMMENNRER+I VAGCFF Sbjct: 10 NEDRHLLRSTDGDEVGIGGGEGDLDVESQSPAIRSGAGGVRDLFKHIDRRFSLSGRRLSFKRMENIRVDRERHNPSSSSAFSAAGEEDGGGISNLHSVDDRNDEYGFDEEVLGDSAPPEWALLLIGCLIGVAAGICVAGFNKGVHVIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILDQIRQSNSSQRQGLDFLAGIYPVIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFALMMENNRERRIALTAAGAASGIASGFNAAVAGCFF 297
BLAST of CF838504 vs. ExPASy Swiss-Prot
Match: CLCE_ARATH (Chloride channel protein CLC-e OS=Arabidopsis thaliana GN=CLC-E PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.531e-22 Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 341 VAFFNKGVHIIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLLEILNQIKQS---------SSLDRQGFDLVAGVFPTIKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNRERKIXXXXXXXXXXXXXXXXXXVAGCFF 796 V FN VH++ +++W G P+ GA+WLR + W R++L+P GG++V ILNQ+++S SSLDR + A + P +K + A VTLGTG SLGPEGPSV+IG S A G + + + + VAGCFF Sbjct: 91 VVLFNNCVHLLRDFSWDGIPDRGASWLREAPIGSNWLRVILVPTIGGLVV-------SILNQLRESAGKSTGDSHSSLDR----VKAVLRPFLKTVAACVTLGTGNSLGPEGPSVEIGASIAKGVNSLFNKSPQTGFSLLAAGSAAGISSGFNAAVAGCFF 240 The following BLAST results are available for this feature:
BLAST of CF838504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838504 ID=CF838504; Name=CF838504; organism=Citrus sinensis; type=EST; length=797bpback to top |