CF838542

Overview
NameCF838542
Unique NameCF838542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_ORYSJ (Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2)

HSP 1 Score: 264.618 bits (675), Expect = 4.098e-70
Identity = 124/168 (73.81%), Postives = 145/168 (86.31%), Query Frame = 3
Query:   15 GPVKGGNTVIALIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 506
            GPVKGG+TVIA  +DPDGY FEL++RGPTPEPLCQVMLRVGDLDR+I FY+KA GM+LLRK+D PDYKYTIA++GY  EDK  V+ELTYN+GVTEY KGN YAQ+AIGT+DVYK+AEA++L     GGKI R+PGPLPG+NTKI + LDPDGWK V VDN DFLKEL+
Sbjct:  124 GPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291          

HSP 2 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 69/118 (58.47%), Postives = 82/118 (69.49%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLS-GGKITREPGPLPGINTKITACLDPDGW 461
            L   + RVGDLDR I  Y + FGM+LLRKRD P+ KYT A +G+GPED N  LELTYN+GV +YD G G+   AI T+DVYK AE IK S   KITREPGP+ G +T I    DPDG+
Sbjct:   25 LLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKITREPGPVKGGSTVIAFAQDPDGY 142          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_BRAOG (Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.668e-63
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 3
Query:   15 GPVKGGNTVIALIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 506
            GPVKGG +VIA ++DPDGY FEL++RGPTPEPLCQVMLRVGDLDRA+ F +KA GM LLR+ + P+Y  TI +MGY  E ++ VLELTYN+GVTEY KGN YAQIAIGTDDVYK+AE +K+     GGKITRE GPLPG+ TKI + LDPDGWK V VDN DFLKELE
Sbjct:  116 GPVKGGGSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282          

HSP 2 Score: 133.65 bits (335), Expect = 1.091e-30
Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 3
Query:  120 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW 461
            V+ RVGDLDR I FY + FGM++LRKRD P+ KY+ A +G+GPE  N V+ELTYN+GV+ YD G G+   AI T DV K  EA++  GG +TREPGP+ G  + I    DPDG+
Sbjct:   21 VVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVIAFVKDPDGY 134          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_VIBCH (Probable lactoylglutathione lyase OS=Vibrio cholerae GN=gloA PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.591e-35
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN 482
            +   MLRVGDLD++I FY +  GM LLRK +N +YKYT+A +GYG E + AV+ELTYN GV +Y+KGN Y  IAIG DD+Y T + IK +GG +TREPGP+ G  T I    DPDG+    + N
Sbjct:    6 ILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMIELIQN 129          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_HAEIN (Lactoylglutathione lyase OS=Haemophilus influenzae GN=gloA PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33
Identity = 65/124 (52.42%), Postives = 85/124 (68.55%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN 482
            +   MLRVGDLDR+I FY+   GM LLR  +NP+YKYT+A +GY   +  A +ELTYN GV +Y+ G  Y  IAIG DD+Y T EA++ SGG +TRE GP+ G +T I    DPDG+K  F++N
Sbjct:    3 ILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNWGVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKIEFIEN 126          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_VIBPA (Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus GN=gloA PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.522e-32
Identity = 64/124 (51.61%), Postives = 84/124 (67.74%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN 482
            +   MLRVGDLD++I FY +  GM+LLR  +N +Y+YT+A +GYG E + AV+ELTYN G TEYD G  +  IAIG DD+Y T +AIK +GG +TRE GP+ G  T I    DPDG+    + N
Sbjct:    6 ILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNWGKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMIELIQN 129          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_SHIFL (Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD 488
            L   MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++  D
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_SALTY (Lactoylglutathione lyase OS=Salmonella typhimurium GN=gloA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 63/126 (50.00%), Postives = 83/126 (65.87%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD 488
            L   MLRVGDL R+I FY    GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV  YD GN Y  IA+  D+  +  E I+ +GG +TRE GP+ G +T I    DPDG+K   ++  D
Sbjct:    3 LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_SALTI (Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 63/126 (50.00%), Postives = 83/126 (65.87%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD 488
            L   MLRVGDL R+I FY    GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV  YD GN Y  IA+  D+  +  E I+ +GG +TRE GP+ G +T I    DPDG+K   ++  D
Sbjct:    3 LLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKIELIEAKD 128          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_ECOLI (Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD 488
            L   MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++  D
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
BLAST of CF838542 vs. ExPASy Swiss-Prot
Match: LGUL_ECO57 (Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  111 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD 488
            L   MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++  D
Sbjct:    3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD 128          
The following BLAST results are available for this feature:
BLAST of CF838542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
LGUL_ORYSJ4.098e-7073.81Lactoylglutathione lyase OS=Oryza sativa subsp. ja... [more]
LGUL_BRAOG1.668e-6370.24Putative lactoylglutathione lyase OS=Brassica oler... [more]
LGUL_VIBCH5.591e-3554.03Probable lactoylglutathione lyase OS=Vibrio choler... [more]
LGUL_HAEIN6.834e-3352.42Lactoylglutathione lyase OS=Haemophilus influenzae... [more]
LGUL_VIBPA1.522e-3251.61Probable lactoylglutathione lyase OS=Vibrio paraha... [more]
LGUL_SHIFL1.425e-3049.21Lactoylglutathione lyase OS=Shigella flexneri GN=g... [more]
LGUL_SALTY1.425e-3050.00Lactoylglutathione lyase OS=Salmonella typhimurium... [more]
LGUL_SALTI1.425e-3050.00Lactoylglutathione lyase OS=Salmonella typhi GN=gl... [more]
LGUL_ECOLI1.425e-3049.21Lactoylglutathione lyase OS=Escherichia coli (stra... [more]
LGUL_ECO571.425e-3049.21Lactoylglutathione lyase OS=Escherichia coli O157:... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06O04_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838542 ID=CF838542; Name=CF838542; organism=Citrus sinensis; type=EST; length=755bp
CACGAGCGGTAACTGGTCCTGTTAAAGGTGGCAATACCGTCATTGCTCTT
ATTGAAGATCCAGATGGTTACAAGTTTGAGCTTTTGGAGAGAGGGCCAAC
ACCTGAGCCCCTATGTCAAGTAATGCTTAGAGTGGGTGATCTTGATCGTG
CTATAAATTTCTACAAGAAGGCTTTTGGCATGGAACTTCTGCGGAAAAGA
GATAACCCTGATTACAAGTATACAATAGCTGTGATGGGCTATGGTCCTGA
AGATAAAAATGCTGTGCTGGAACTGACATATAACCATGGAGTCACAGAAT
ATGACAAAGGAAATGGTTACGCTCAGATTGCAATAGGCACAGATGATGTT
TACAAGACAGCTGAAGCAATCAAACTGAGTGGTGGAAAGATTACCCGTGA
ACCTGGGCCCCTGCCTGGTATCAACACAAAGATTACTGCTTGCTTGGATC
CTGATGGCTGGAAATCTGTCTTTGTCGATAATCTTGACTTTCTCAAGGAG
CTAGAATGACCAAGACATCATTGTAGCACCCACACCACTTGTTGAATCTA
AAAGGATTCATGATAATTTTGTCTATTAGAAAGTTCCTTCTGCTAGACTT
TCTATTTTTATAATCCCCCATGACAGAATGCTACTAATCCCAATTCATAG
AATTCTTTCTGTAATAGATTGTTGTAAGTATATTCTTACCTTTTAGTCAA
TATGTGCACAATAGTTCTGAAACACATTCAATTCAACAGGTATGCAAGAT
TCAAA
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