CF838553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1) HSP 1 Score: 426.402 bits (1095), Expect = 8.701e-119 Identity = 216/246 (87.80%), Postives = 219/246 (89.02%), Query Frame = 1 Query: 49 MERLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQ 786 MERLQR+F LGH PDSPTLD+SEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYR WTDGLTL RFD HSKTNEQTVQ Sbjct: 1 MERLQRIFGAGGG-LGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQ 245
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2) HSP 1 Score: 369.007 bits (946), Expect = 1.649e-101 Identity = 186/246 (75.61%), Postives = 200/246 (81.30%), Query Frame = 1 Query: 49 MERLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQ 786 M+RL R+ PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRV+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN M+LG EPRQTTSNLGHLNKPSIQALIHGLNRHYYSI INYR W +GLTL + H K NE V+ Sbjct: 1 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVK 246
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 1.649e-101 Identity = 186/246 (75.61%), Postives = 200/246 (81.30%), Query Frame = 1 Query: 49 MERLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQ 786 M+RL R+ PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRV+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN M+LG EPRQTTSNLGHLNKPSIQALIHGLNRHYYSI INYR W +GLTL + H K NE V+ Sbjct: 1 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVK 246
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 3.673e-101 Identity = 180/228 (78.95%), Postives = 196/228 (85.96%), Query Frame = 1 Query: 100 PPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTV 783 PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV+V+DVFAMPQ+GTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLINP ++LGQEPRQTTSNLGHL KPS+QALIHGLNRHYYSI+INYR W DGLTL ++ H NE TV Sbjct: 16 PPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTV 243
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2) HSP 1 Score: 346.28 bits (887), Expect = 1.144e-94 Identity = 175/245 (71.43%), Postives = 192/245 (78.37%), Query Frame = 1 Query: 49 MERLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTV 783 ME LQR+ G D P +D+SE VYISSLALLKML+HGR G PMEVMGLMLGEFVD++TVRVVDVFAMPQSGTGVSVEAVD VFQ NM+DMLKQTGRPEMVVGWYHSHPGFGCWLS VDINTQQSFE L RAVAVVVDPIQSVKGKVVIDAFRLINP T+M+GQEPRQTTSNLGH+NKPSIQALIHGL RHYYS+ INY+ W GL L F+ ++ N ++ Sbjct: 1 MESLQRLLQGARMGTGMMG-DQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKPSIQALIHGLGRHYYSLRINYKKTELEEIMLLNLHKQPWAHGLLLENFNSAAEKNHASI 244
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.952e-94 Identity = 180/245 (73.47%), Postives = 191/245 (77.96%), Query Frame = 1 Query: 49 MERLQRM--FXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQ 777 MER R+ G P DS +D+SE VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV V+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RAVAVVVDPIQSVKGKVVIDAFR INPQ+M L QEPRQTTSNLGHL KPSIQALIHGLNRHYYSI I YR W D +++ + SK EQ Sbjct: 1 MERFLRLGGLGGNLGTFGANPQDSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDLEQKMLLNLNKLSWMDAVSVENY---SKCGEQ 242
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: RPN11_ASHGO (26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii GN=RPN11 PE=3 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.355e-87 Identity = 164/242 (67.77%), Postives = 185/242 (76.45%), Query Frame = 1 Query: 49 MERLQR-MFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTN 771 M+RLQR M +G + P D+ E VYISSLALLKMLKH RAGVPMEVMGLMLG+FVDEYTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD++TQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+P T++ QEPRQTTSN+G LNKP+IQ+LIHGLNRHYYS+ I+Y W GL +H + + N Sbjct: 1 MDRLQRLMMSQRSNMIGAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKPNIQSLIHGLNRHYYSLNIDYHKTSAELNMLMNLHKEQWQSGLKMHDYKEKERIN 242
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 1.831e-84 Identity = 153/224 (68.30%), Postives = 177/224 (79.02%), Query Frame = 1 Query: 112 SPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTV 783 +P D++E ++ISSLALLKML+H RAGVP+EVMGLMLGE +DEYT+RV+DVFAMPQSGT VSVEA+D VFQT MLDMLKQTGR E+V+GWYHSHPGFGCWLS VD+NTQQSFE L RAVAVVVDP+QSV+GKVVIDAFR I EPRQ TSNLGHL PSIQALIHGLNR+YYSIAINYR WT+GL + +FD H ++NE+ + Sbjct: 22 TPLPDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAMPQSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPT---AEPRQITSNLGHLQDPSIQALIHGLNRNYYSIAINYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQI 242
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: RPN11_CANGA (26S proteasome regulatory subunit RPN11 OS=Candida glabrata GN=RPN11 PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 4.080e-84 Identity = 160/234 (68.38%), Postives = 176/234 (75.21%), Query Frame = 1 Query: 49 MERLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRF 750 MERLQR+ D D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVDEYTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+ ++ QEPRQTTSN G +NK +IQALIHGLNRHYYS+ I+Y W GL + + Sbjct: 1 MERLQRLMMNTKVGAADANKD----DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNQEPRQTTSNSGLMNKANIQALIHGLNRHYYSLNIDYHKTPAETKMLLNLHKEQWQSGLKMQDY 230
BLAST of CF838553 vs. ExPASy Swiss-Prot
Match: RPN11_YEAST (26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae GN=RPN11 PE=1 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 6.959e-84 Identity = 160/241 (66.39%), Postives = 180/241 (74.69%), Query Frame = 1 Query: 49 MERLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTN 771 MERLQR+ D D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+ ++ EPRQTTSN G LNK +IQALIHGLNRHYYS+ I+Y W GL ++ ++ ++N Sbjct: 1 MERLQRLMMNSKVGSADTGRD----DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLHKEQWQSGLKMYDYEEKEESN 237 The following BLAST results are available for this feature:
BLAST of CF838553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838553 ID=CF838553; Name=CF838553; organism=Citrus sinensis; type=EST; length=786bpback to top |