CF838565
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1_TOBAC (Glutamate--cysteine ligase, chloroplastic OS=Nicotiana tabacum GN=GSH1 PE=2 SV=2) HSP 1 Score: 269.626 bits (688), Expect = 1.491e-71 Identity = 142/203 (69.95%), Postives = 155/203 (76.35%), Query Frame = 2 Query: 221 MTLISRASPSCRVLTDVTRCTIRRSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 M L+S+A S + ++ +C SG + N E +MK+ C + SSR S+K Q ++LD VAASPPTEDAVV EPLTKEDLV YLASGCK KEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLN IAERFDWEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 1 MALMSQAGSSHCIYSEKMKCI---SGHSSITSNMEMLKMKDICFG-NISSRNSSKPMQGIYLDRVGVERRRGRLAIVAASPPTEDAVVAAEPLTKEDLVAYLASGCKSKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNGIAERFDWEKVMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 199
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1_SOLLC (Glutamate--cysteine ligase, chloroplastic OS=Solanum lycopersicum GN=GSH1 PE=2 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 7.399e-71 Identity = 139/203 (68.47%), Postives = 155/203 (76.35%), Query Frame = 2 Query: 221 MTLISRASPSCRVLTDVTRCTIRRSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 M L+S+A S + ++ RC SG + N + RM+E C SSR +++ Q +L++ VAASPPTEDAVV EPLTKEDLVGYLASGCK KEKWRIGTEHEKFGFEFGTLRPMKY+QIA+LLN IAERFDWEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 1 MALMSQAGSSHCIYSEKVRCI---SGHRSIINNMDMFRMREICFGVDISSRNASRRVQGNYLNHIGVGSRRGDLTIVAASPPTEDAVVAAEPLTKEDLVGYLASGCKSKEKWRIGTEHEKFGFEFGTLRPMKYDQIADLLNGIAERFDWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 200
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1_ARATH (Glutamate--cysteine ligase, chloroplastic OS=Arabidopsis thaliana GN=GSH1 PE=1 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 1.144e-63 Identity = 134/204 (65.69%), Postives = 153/204 (75.00%), Query Frame = 2 Query: 221 MTLISRASPSCRVL-TDVTRCTIRRSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 M L+S+A S V+ + V ++ V G +N + RMKE +F SS YS +S L ++ VAASPPTE+AVV TEPLT+EDL+ YLASGCK K+K+RIGTEHEKFGFE TLRPMKY+QIAELLN IAERF+WEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 1 MALLSQAGGSYTVVPSGVCSKAGTKAVVSGGVRNLDVLRMKE---AFGSS--YSRSLSTKSMLLHSVKRSKRGHQLIVAASPPTEEAVVATEPLTREDLIAYLASGCKTKDKYRIGTEHEKFGFEVNTLRPMKYDQIAELLNGIAERFEWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 199
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1_BRAJU (Glutamate--cysteine ligase, chloroplastic OS=Brassica juncea GN=GSH1 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.549e-63 Identity = 127/180 (70.56%), Postives = 137/180 (76.11%), Query Frame = 2 Query: 290 RSGVCGLAKNAEASRMKETCVSFSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 R+G ++ RMKET VS S+ L + VAASPPTE+AVV TEPLT+EDL+ YLASGCK KEKWRIGTEHEKFGFE TLRPMKY+QIAELLNSIAERF+WEKVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 21 RTGTKTVSGCVNVLRMKETYVS---------SYSRTLSTKSMLKRSKRGHQLIVAASPPTEEAVVATEPLTREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTLRPMKYDQIAELLNSIAERFEWEKVMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 191
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1_MEDTR (Glutamate--cysteine ligase, chloroplastic OS=Medicago truncatula GN=GSH1 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 7.416e-63 Identity = 123/167 (73.65%), Postives = 137/167 (82.04%), Query Frame = 2 Query: 335 MKETCVS--FSSSSRYSAKISQVLHLDNAXXXXXXXXXXXVAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 +++T +S FS SS+ S ++L + VAASPPTEDAVV TEPLTK+DL+ YLASGCK K+KWRIGTEHEKFGFE G+LRPMKYEQI+ELLN IAERFDW+KVMEGD IIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 26 IRKTSISNTFSFSSKNSLSFKRILTSGGSRRFI-------VAASPPTEDAVVATEPLTKQDLIDYLASGCKTKDKWRIGTEHEKFGFELGSLRPMKYEQISELLNGIAERFDWDKVMEGDNIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 185
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1A_ORYSJ (Glutamate--cysteine ligase A, chloroplastic OS=Oryza sativa subsp. japonica GN=GSH1-1 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.382e-58 Identity = 105/127 (82.68%), Postives = 117/127 (92.13%), Query Frame = 2 Query: 449 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 VAASPPTE+AV +TEPLTKEDLV YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 43 VAASPPTEEAVQMTEPLTKEDLVAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 169
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1A_ORYSI (Glutamate--cysteine ligase A, chloroplastic OS=Oryza sativa subsp. indica GN=GSH1-1 PE=2 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 9.382e-58 Identity = 105/127 (82.68%), Postives = 117/127 (92.13%), Query Frame = 2 Query: 449 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 VAASPPTE+AV +TEPLTKEDLV YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 43 VAASPPTEEAVQMTEPLTKEDLVAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 169
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1B_ORYSJ (Glutamate--cysteine ligase B, chloroplastic OS=Oryza sativa subsp. japonica GN=GSH1-2 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.090e-57 Identity = 104/127 (81.89%), Postives = 117/127 (92.13%), Query Frame = 2 Query: 449 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 VAASPPTE+AV +TEPLTKEDL+ YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 47 VAASPPTEEAVQMTEPLTKEDLMAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 173
BLAST of CF838565 vs. ExPASy Swiss-Prot
Match: GSH1B_ORYSI (Glutamate--cysteine ligase B, chloroplastic OS=Oryza sativa subsp. indica GN=GSH1-2 PE=3 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 2.090e-57 Identity = 104/127 (81.89%), Postives = 117/127 (92.13%), Query Frame = 2 Query: 449 VAASPPTEDAVVVTEPLTKEDLVGYLASGCKPKEKWRIGTEHEKFGFEFGTLRPMKYEQIAELLNSIAERFDWEKVMEGDYIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 829 VAASPPTE+AV +TEPLTKEDL+ YL SGCKPKE WRIGTEHEKFGFE TLRP+KY+QI ++LN +AERFDW+K++E + +IGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV Sbjct: 47 VAASPPTEEAVQMTEPLTKEDLMAYLVSGCKPKENWRIGTEHEKFGFEVDTLRPIKYDQIRDILNGLAERFDWDKIVEENNVIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAV 173 The following BLAST results are available for this feature:
BLAST of CF838565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838565 ID=CF838565; Name=CF838565; organism=Citrus sinensis; type=EST; length=830bpback to top |