CF838586

Overview
NameCF838586
Unique NameCF838586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length530
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.031e-34
Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFE-VLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 529
            GG SIWGKKFNDEIR +LKHN+RGI+SMANSGPNTNGSQFFI+YAK PHL+  YTVFG+VI G +  LD+MEK       RPL E RI  VTIHANP+A
Sbjct:   68 GGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGADSTLDMMEKVPVDEKHRPLQEFRIKSVTIHANPIA 166          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.585e-30
Identity = 63/100 (63.00%), Postives = 75/100 (75.00%), Query Frame = -2
Query:  233 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLAV 529
            GGTSIWGKKF DE  E LKH+ RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTVFG+VI G E LD +EK        RPL ++ I  +TIHANP A+
Sbjct:   62 GGTSIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAL 161          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.070e-30
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLA 529
            GG+SIWGKKF DE  E LKHN RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTVFG+VI G E LD +EK        RPL ++ I  +TIHANP A
Sbjct:   62 GGSSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.704e-30
Identity = 63/99 (63.64%), Postives = 73/99 (73.74%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLA 529
            GG SIWGKKF DE  E LKHN RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTVFG+VI G E LD +EK        RPL ++ I  +TIHANP A
Sbjct:   62 GGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_DICDI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dictyostelium discoideum GN=ppil3 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.612e-30
Identity = 64/98 (65.31%), Postives = 72/98 (73.47%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 529
            GG SIW K+F DE    LKHN RGILSMANSGP+TNGSQFFI+Y K   LN +YTVFG++I G EVLDLMEK      D PL EI +  VTIHANP+A
Sbjct:   62 GGESIWKKQFKDEFPSHLKHNTRGILSMANSGPDTNGSQFFITYGKHRSLNKVYTVFGKIIAGIEVLDLMEKVPVDDKDLPLNEIILKSVTIHANPIA 159          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus musculus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.027e-29
Identity = 62/99 (62.63%), Postives = 73/99 (73.74%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD-RPLAEIRINRVTIHANPLA 529
            GG+SIW KKF DE  E LKHN RG++SMAN+GPNTNGSQFFI+Y KQPHL+  YTVFG+VI G E LD +EK        RPL ++ I  +TIHANP A
Sbjct:   62 GGSSIWAKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 160          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.289e-29
Identity = 58/98 (59.18%), Postives = 77/98 (78.57%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 529
            GG SIWG+ F+DEIR++L+ N RG+++MAN+GP+TN SQFFI+YAKQP L+G Y++FG+VI G E LD MEK       RPL EI++  VT+HANP+A
Sbjct:   62 GGQSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSMEKTPVNPKSRPLQEIKLLNVTVHANPIA 159          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 7.363e-28
Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = -2
Query:  233 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFE---VLDLMEKAQTGSGDRPLAEIRINRVTIHANPLAV 529
            GG SIWGK F DEIR SLK + RGI++ AN+GP+TN SQFFI+YAKQPHL+G YT+ G+VI G E    LD ME     + +RP +EIR+  VT+HANP+A+
Sbjct:   62 GGQSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAEDGGTLDAMEAIPVDAKNRPTSEIRMTGVTVHANPIAI 163          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.798e-27
Identity = 61/100 (61.00%), Postives = 70/100 (70.00%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI--HGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 529
            GG SIWG  F DEIR +L+H ARG+LSMAN GP TNGSQFFI++ K PHL+GL TVFGRVI   G   L  ME  +    +RP   +RI  VTIHANPLA
Sbjct:   67 GGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAVEVDRKNRPKEPVRIENVTIHANPLA 166          
BLAST of CF838586 vs. ExPASy Swiss-Prot
Match: CYP10_CAEEL (Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorhabditis elegans GN=cyn-10 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.005e-25
Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2
Query:  236 GGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 529
            GG SIWG  F DE   +LKH++RG +SMAN+GP++N SQFFI+YAKQ HL+  YT+FG+VI GF+ L+ +E  +  +  RPL + +I  VTIHANP+A
Sbjct:   62 GGESIWGGPFEDEFVSALKHDSRGCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLVQQKIQNVTIHANPMA 159          
The following BLAST results are available for this feature:
BLAST of CF838586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PPIL3_RHIOR4.031e-3470.71Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
PPIL3_CHICK1.585e-3063.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL3_RAT2.070e-3063.64Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN2.704e-3063.64Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL3_DICDI4.612e-3065.31Peptidyl-prolyl cis-trans isomerase-like 3 OS=Dict... [more]
PPIL3_MOUSE1.027e-2962.63Peptidyl-prolyl cis-trans isomerase-like 3 OS=Mus ... [more]
PPIL3_CRYNE2.289e-2959.18Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL3_USTMA7.363e-2858.82Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
PPIL3_GIBZE2.798e-2761.00Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
CYP10_CAEEL2.005e-2555.10Peptidyl-prolyl cis-trans isomerase 10 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_04K06_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa04K06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838586 ID=CF838586; Name=CF838586; organism=Citrus sinensis; type=EST; length=530bp
TTTTTTTTTTTTTTTGAAACAAGATTTAAATTACTAACGTTTCCTCATCG
TCAATCTCACCATTTGATGCTACATAAAATTCTGCGGTTACTTCTTCCTT
CAAGCCCATAGTCATAACTGGGAAAAGAAAAATGTACAGAGTCTACTGGG
AGTTTAATCGTAAGTCACTGTTCCCACTCCACACTAAGCCTCTTTACAAT
GTTATACAACAAGAAATTTTCAGACAAAGCTAGACAGCAAGTGGGTTAGC
ATGTATGGTAACTCGATTGATCCTTATCTCCGCAAGTGGCCGGTCCCCTG
ATCCAGTTTGAGCCTTTTCCATAAGGTCAAGAACTTCGAACCCATGAATT
ACTCTACCAAACACAGTGTACAATCCGTTAAGATGGGGCTGCTTTGCATA
AGAGATGAAGAATTGGCTTCCATTAGTGTTAGGGCCACTATTGGCCATTG
ACAGTATCCCTCTAGCATTATGCTTGAGGGACTCCCTTATCTCATCATTG
AACTTCTTGCCCCATATGCTTGTTCCGCCT
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