CF838686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: PPF1_PEA (Inner membrane protein PPF-1, chloroplastic OS=Pisum sativum GN=PPF-1 PE=2 SV=2) HSP 1 Score: 307.375 bits (786), Expect = 5.594e-83 Identity = 166/254 (65.35%), Postives = 181/254 (71.26%), Query Frame = 3 Query: 3 KTLPLTPPFVGTXXXXXXXXXXRHGLHRL--PNRRLASTRVRLSFQEXXXXXXXXXXXXXNSVFSRTESLLYXXXXXXXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 758 KTL +P F+GT LHR PNR T+V+ SF + + +F+R E LLY QKNGGWFGFIS+ MEFVLK+LKDG+ +VHVPYSYGFAIILLTVIVK AT PLTK+QVESTLAMQNLQPKIKAIQ+RYAGNQERIQLETSRLY QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF WIPSL GPT+IAARQSGSGISWL Sbjct: 3 KTLISSPSFLGTPLP---------SLHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATVAADAAASTDVAA------QKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWL 241
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: ALB3_ARATH (Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 2.350e-81 Identity = 159/228 (69.74%), Postives = 173/228 (75.88%), Query Frame = 3 Query: 81 HRLPNRRL--ASTRVRLSFQEXXXXXXXXXXXXXNSVFSRTESLLYXXXXXXXXXXXXXXXXXXXXXXXXXQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 758 +R N +L ST VR S E ++F+R ESLLY QK+GGWFGFIS+AME VLKILKDG+ AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL TEGFFWIPSL GPT+IAARQSGSGISWL Sbjct: 40 YRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGAIFTRAESLLYTIADAAVVGADSVVTTDSSAV----QKSGGWFGFISDAMELVLKILKDGLSAVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAARQSGSGISWL 263
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: ALB31_ARATH (ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3) HSP 1 Score: 256.529 bits (654), Expect = 1.132e-67 Identity = 121/156 (77.56%), Postives = 143/156 (91.67%), Query Frame = 3 Query: 291 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWL 758 ++ WF I+ ME +LK+LKDG+ VHVPYSYGFAIILLTV+VK ATFPLTKKQVES +AM++L P+IKAIQ+RYAG+QE+IQLET+RLY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTT+AARQ+GSGISWL Sbjct: 92 QSNDWFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWL 247
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: ALB32_CHLRE (Inner membrane ALBINO3-like protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.2 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.306e-54 Identity = 101/155 (65.16%), Postives = 126/155 (81.29%), Query Frame = 3 Query: 297 GGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLL 761 GG +++ EFVL+ L +G+++ +PYSYGFAII LTV+VKVATFPLT+KQVESTL++Q LQP++K +Q +YA + E +QLET+RLY++AGVNPLAGC PTLATIPV+IGLY ALSN A EGLLTEGFFWIPSL GPTTI G G+ WL+ Sbjct: 71 GGPIDVLAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLVKVATFPLTQKQVESTLSLQALQPRVKELQAKYADDPENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNALSNAAKEGLLTEGFFWIPSLGGPTTI-----GGGLEWLV 220
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: ALB31_CHLRE (Inner membrane ALBINO3-like protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.1 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.292e-52 Identity = 97/158 (61.39%), Postives = 134/158 (84.81%), Query Frame = 3 Query: 288 QKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWL 758 Q+ GGW +++A+E VL L++G+D +HVPYSYG++IILLT+IVK+ T+PLTK+QVES +A+Q L+P+I I+ R+ ++++IQ ETS LY QAGVNPLAGCLPTLATIP++IGL+ +L+NVAN+GLL T+GF+++PSL+GPTT+A RQSG G SWL Sbjct: 108 QRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTYPLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATIPIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWL 265
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: OXAA_ANADF (Inner membrane protein oxaA OS=Anaeromyxobacter sp. (strain Fw109-5) GN=oxaA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.356e-20 Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 306 FGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGIS 752 F F + + FV++ L+ + ++G AIILLTV+VKV +PLT K ++S M+ LQP+I+ ++ ++ ++E++ L T +LY+Q VNPL GCLP L +P+W LY L L E F WI L+ + G+S Sbjct: 337 FAFFARLLLFVMRWLE------RLVANWGLAIILLTVLVKVLLYPLTAKSMQSMNEMRKLQPEIEKLKAKHGNDREKLNLATMQLYQQHKVNPLGGCLPMLIQLPIWFALYATLQTSVE--LYREPFLWIHDLTVKDPLYVLPIAMGVS 477
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: OXAA_SYNFM (Inner membrane protein oxaA OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=oxaA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.022e-20 Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF-FWIPSLSGP 713 GWF FI++ + +VL +++G AIILLT+++K+ +PLT+K +S M+ +QPK+ I+++Y G++E++ E LYR VNP+ GCLP L IPV+ LY+ L+ L E F WI L+ P Sbjct: 338 GWFTFIAKPLVYVLDWF------YRYTHNWGVAIILLTIVIKILFWPLTQKSYQSMQKMKKIQPKMTQIREKYKGDREKMNQELMGLYRTYKVNPMGGCLPMLLQIPVFFALYRMLNGAVE--LRHEPFMLWIDDLTAP 468
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: OXAA_PELPD (Inner membrane protein oxaA OS=Pelobacter propionicus (strain DSM 2379) GN=oxaA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.946e-20 Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 300 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSG 740 GWF I++ + + LK + +YG AII++T+I+K FPLT K +S MQ +QP + A++++Y ++E + LYR VNPL GCLP L IPV+ LY+AL + E +FWI LSGP + + G Sbjct: 326 GWFTVIAKPLLYTLKYFYRYVG------NYGVAIIIITIILKALFFPLTHKSYKSMKDMQKIQPMMAALKEKYKDDREGMNKAVMELYRDHKVNPLGGCLPMLVQIPVFFALYKALM-FSIELRHAPFYFWITDLSGPDNLFGQMLG 465
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: OXAA_CHLT3 (Inner membrane protein oxaA OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=oxaA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.946e-20 Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 384 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTI 722 SYG IIL + +K+ T+PLT +S M LQP++KAIQ++Y N E++Q E S +YR+AGVNPL GCLPT+ +P+ ++ + L EGF W LS P +I Sbjct: 369 SYGVIIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQEQYKDNPEKLQAEISGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ--LRQEGFLWSNDLSVPDSI 479
BLAST of CF838686 vs. ExPASy Swiss-Prot
Match: OXAA_CLOTE (Membrane protein oxaA OS=Clostridium tetani GN=oxaA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.148e-19 Identity = 44/121 (36.36%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 381 YSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 743 YSYG AII +T+I+K+ PL K + ST+ + +QP+I+ IQ++Y + +R+Q E +LY++ +NP CLP L P+ I LY +N+ +G+ F W+ L+ P + A +G+ Sbjct: 28 YSYGVAIIFVTLIIKLILLPLNIKSMRSTIRINEIQPEIQKIQKKYKNDPQRLQQEQMKLYKEYNINPFGSCLPLLLQWPILIALYYVFNNI--QGISGVSFLWVKDLASPDIVLAVLAGA 146 The following BLAST results are available for this feature:
BLAST of CF838686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 388
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838686 ID=CF838686; Name=CF838686; organism=Citrus sinensis; type=EST; length=762bpback to top |