CF838722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 4.623e-33 Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 209 DGS+CLDILQNQWSPIY VAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE+VEQSWTAD Sbjct: 84 DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWTAD 152
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.757e-32 Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 209 DGS+CLDILQNQWSPIY VAAILTSIQSLLCDPNPNSPANSEAARMFSE+KREYNRRVRE+VEQSWTAD Sbjct: 84 DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVREVVEQSWTAD 152
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.295e-32 Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 209 DGS+CLDILQNQWSPIY VAAILTSIQSLLCDPNPNSPANSEAARM+SENKREYNR+VRE+VEQSWTAD Sbjct: 84 DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVREVVEQSWTAD 152
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 8.719e-32 Identity = 63/69 (91.30%), Postives = 68/69 (98.55%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 209 DGS+CLDILQNQWSPIY VAAILTSIQSLLCDPNPNSPANSEAARM+SE+KREYNRRVR++VEQSWTAD Sbjct: 84 DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.392e-29 Identity = 58/68 (85.29%), Postives = 66/68 (97.06%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTA 206 DGS+CLDILQNQWSPIY +AAILTSIQSLLCDPNPNSPANSE+AR+F ENKREYNR+V+EIVEQSW++ Sbjct: 84 DGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWSS 151
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 9.976e-28 Identity = 57/66 (86.36%), Postives = 64/66 (96.97%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 200 DGS+CLDILQNQWSPIY VAA+LTSIQSLLCDPNP+SPAN+EAAR+FSENKREYNR+V EIVEQS+ Sbjct: 84 DGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIEIVEQSY 149
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 8.740e-24 Identity = 50/66 (75.76%), Postives = 60/66 (90.91%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 200 DGS+CLDILQN+WSP Y VAAILTSIQSLL +PNPNSPANS AA+++ EN+REY +RV++IVEQSW Sbjct: 84 DGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQIVEQSW 149
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 200 DGS+CLDILQN+WSP Y V++ILTSIQSLL +PNPNSPANS+AA+++ ENKREY +RV IVEQSW Sbjct: 84 DGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 200 DGS+CLDILQN+WSP Y V++ILTSIQSLL +PNPNSPANS+AA+++ ENKREY +RV IVEQSW Sbjct: 84 DGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149
BLAST of CF838722 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = 3 Query: 3 DGSLCLDILQNQWSPIYHVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 200 DGS+CLDILQN+WSP Y V++ILTSIQSLL +PNPNSPANS+AA+++ ENKREY +RV IVEQSW Sbjct: 84 DGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSW 149 The following BLAST results are available for this feature:
BLAST of CF838722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838722 ID=CF838722; Name=CF838722; organism=Citrus sinensis; type=EST; length=487bpback to top |