CF838747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838747 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.004e-80 Identity = 91/111 (81.98%), Postives = 94/111 (84.68%), Query Frame = 2 Query: 2 MVDAKPADSMQGTPLLATATLPVFTRGIYSTKRITLETXXXXXXXXXKALIITTPAGKGTFNDILFLHGTSLSNKSYSKIFDHIPSHGFIVVAPHLYNTIPPPSATNELTA 334 MVDAKPA S+QGTPLLATATLPVFTRGIYSTKRITLET K LII TPAGKGTFN ILFLHGTSLSNKSYSKIFDHI SHGFIVVAP LY +IPPPSATNEL + Sbjct: 4 MVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNS 114 HSP 2 Score: 143.28 bits (360), Expect = 1.004e-80 Identity = 76/101 (75.25%), Postives = 78/101 (77.23%), Query Frame = 1 Query: 331 SASEVAEWLPQGLQQNLPENTEANVILVAVMGHNRGGQTAFALSLRYGFGAVIRLYPGAGTSKTTGXXXXXXXXXXXXXXXXGTEIGTGLDGVARCITACA 633 SA+EVAEWLPQGLQQNLPENTEANV LVAVMGH+RGGQTAFALSLRYGFGAVI L P AGTSKTTG T IGTGL GVARCITACA Sbjct: 114 SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACA 214
BLAST of CF838747 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.866e-79 Identity = 89/111 (80.18%), Postives = 93/111 (83.78%), Query Frame = 2 Query: 2 MVDAKPADSMQGTPLLATATLPVFTRGIYSTKRITLETXXXXXXXXXKALIITTPAGKGTFNDILFLHGTSLSNKSYSKIFDHIPSHGFIVVAPHLYNTIPPPSATNELTA 334 MVD+KPA S+QGTPLLATATLPVFTRGIYSTKRITLET K LII TPA KGTFN ILFLHGTSLSNKSYSKIFDHI SHGFIVVAP LY +IPPPSATNEL + Sbjct: 4 MVDSKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNS 114 HSP 2 Score: 143.28 bits (360), Expect = 1.866e-79 Identity = 76/101 (75.25%), Postives = 78/101 (77.23%), Query Frame = 1 Query: 331 SASEVAEWLPQGLQQNLPENTEANVILVAVMGHNRGGQTAFALSLRYGFGAVIRLYPGAGTSKTTGXXXXXXXXXXXXXXXXGTEIGTGLDGVARCITACA 633 SA+EVAEWLPQGLQQNLPENTEANV LVAVMGH+RGGQTAFALSLRYGFGAVI L P AGTSKTTG T IGTGL GVARCITACA Sbjct: 114 SAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACA 214
BLAST of CF838747 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 2.897e-17 Identity = 32/95 (33.68%), Postives = 48/95 (50.53%), Query Frame = 2 Query: 26 SMQGTPLLATATLPV-FTRGIYSTKRITLETXXXXXXXXXKALIITTPAGKGTFNDILFLHGTSLSNKSYSKIFDHIPSHGFIVVAPHLYNTIPP 307 +++ +P ++ P F G T I ++ K + IT P GT+ +LF HG L N YS + +HI SHG+I+VAP L +PP Sbjct: 3 AIEDSPTFSSVVTPAAFEIGSLPTTEIPVDPVENDSTAPPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPP 97 HSP 2 Score: 49.2914 bits (116), Expect = 2.897e-17 Identity = 26/70 (37.14%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 334 ASEVAEWLPQGLQQNLPENTEANVILVAVMGHNRGGQTAFALSLRYG--------FGAVIRLYPGAGTSK 519 A V W + L+ +LP + AN +++GH+RGG+TAFA++L + F A+I + P AGT+K Sbjct: 106 AGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAGTNK 175
BLAST of CF838747 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 3.759e-17 Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 2 Query: 149 LIITTPAGKGTFNDILFLHGTSLSNKSYSKIFDHIPSHGFIVVAPHLYNTIPP--PSATNEL 328 LII +P G + +LF+HGT LSN+ YS F++I SHGFIVVAP L+ PP PS +E+ Sbjct: 63 LIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEI 124 HSP 2 Score: 43.5134 bits (101), Expect = 3.759e-17 Identity = 27/71 (38.03%), Postives = 40/71 (56.34%), Query Frame = 1 Query: 334 ASEVAEWLPQGLQ---QNLPENTEANVILVAVMGHNRGGQTAFALSLRYG-------FGAVIRLYPGAGTS 516 A+ VA W+P LQ Q E ++ +A+ GH+RGG++AFAL+L + F A+I + P AG S Sbjct: 127 AASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGFSNIKLDVTFSALIGVDPVAGRS 197
BLAST of CF838747 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 2.501e-15 Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 2 Query: 143 KALIITTPAGKGTFNDILFLHGTSLSNKSYSKIFDHIPSHGFIVVAPHLYNTIPP 307 K L++ TP +G + ++ LHG L N YS++ H+ SHGFI++AP LY+ P Sbjct: 43 KQLLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGP 97 HSP 2 Score: 47.7506 bits (112), Expect = 2.501e-15 Identity = 23/67 (34.33%), Postives = 39/67 (58.21%), Query Frame = 1 Query: 331 SASEVAEWLPQGLQQNLPENTEANVILVAVMGHNRGGQTAFALSL-RYGFGAVIRLYPGAGTSKTTG 528 S +E+ +WL GL LP N+ A+ GH+RGG+TAFA++L ++G+ + +++ G G Sbjct: 105 STAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSNLKISTLIGIDPVDG 171 The following BLAST results are available for this feature:
BLAST of CF838747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838747 ID=CF838747; Name=CF838747; organism=Citrus sinensis; type=EST; length=635bpback to top |