CF838755

Overview
NameCF838755
Unique NameCF838755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11875 contig Csv1_Contig11875:13..600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 9.322e-81
Identity = 144/172 (83.72%), Postives = 151/172 (87.79%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 571
            M  P+VFFDM+VGGQPAGRIVMELFAD TPRTAENFRALCTGEKG G+SGKPLHYK SSFHRVIPGFMCQ            ESIYG+KFADENF+KKHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRT K VV+ DCGQLS
Sbjct:    1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 5.115e-79
Identity = 139/171 (81.29%), Postives = 149/171 (87.13%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 568
            M  PKVFFD+T+GG PAGR+VMELFAD TP+TAENFRALCTGEKGVGK GKPLHYKGS+FHRVIPGFMCQ            ESIYG+KF DENFVKKHTGPGILSMANAGPGTNGSQFF+CTAKTEWL+GKHVVFGQVVEGMDV+K  E VGSSSGR +KPVVIADCGQL
Sbjct:    1 MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.393e-76
Identity = 133/172 (77.33%), Postives = 148/172 (86.05%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 571
            M  PKVFFDM + G PAGRIVMEL+AD TPRTAENFRALCTGEKGVG+SGKPLHYKGS+FHRVIP FMCQ            ESIYG+KFADENF+K+HTGPGILSMANAG GTNGSQFF+CT KTEWLDGKHVVFG+V+EGM+VV+ IEKVGS SG+T++PV IADCGQLS
Sbjct:    1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.540e-75
Identity = 134/172 (77.91%), Postives = 145/172 (84.30%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 571
            M  PKV+FDMT+ GQPAGRIVMEL+ D TPRTAENFRALCTGEKGVG +GKPLH+KGS FHRVIP FMCQ            ESIYGSKF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEKVGSSSG+  KPVV+ADCGQLS
Sbjct:    1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 2.627e-75
Identity = 131/169 (77.51%), Postives = 146/169 (86.39%), Query Frame = 2
Query:   65 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 571
            PKVFFDMT+GG PAG+IVMEL+ D TP+TAENFRALCTGEKGVG+SGKPLH+KGSSFHRVIP FMCQ            ESIYG+KF DENF +KHTGPGILSMANAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEK+GSSSG+  KPVVIADCG++S
Sbjct:    5 PKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 2.627e-75
Identity = 133/169 (78.70%), Postives = 145/169 (85.80%), Query Frame = 2
Query:   65 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 571
            PKV+FDMTVGG+ AGRIVMEL+AD TP TAENFRALCTGE+G+GK GKPLHYKGSSFHRVIP FMCQ            ESIYGSKF DENF+KKHTGPGILSMANAG  TNGSQFF+CT KT WLDGKHVVFGQVVEG++VV+ IEKVGS SGRT+KPVVIADCGQ+S
Sbjct:    5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 6.056e-72
Identity = 130/171 (76.02%), Postives = 139/171 (81.29%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 568
            M  PKV+FDMTVG + AGRIVMEL+AD  P TAENFRALCTGE+G+GKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DENFVKKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+ IEKVGS SGRT+K VV  DCGQL
Sbjct:    1 MVNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 6.056e-72
Identity = 128/172 (74.42%), Postives = 141/172 (81.98%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 571
            M  P+VFFDM++ G P GRI MELFAD TP TAENFRALCTGEKG+GK GKPLH+KGS FHRVIPGFMCQ            ESIYG+KF DENF+KKHTG GILSMAN+GP TNGSQFF+CT KT WLDGKHVVFGQVV+G+DVVKAIEKVGS SG+T+K V I DCGQLS
Sbjct:    1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 5.127e-71
Identity = 128/172 (74.42%), Postives = 140/172 (81.40%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 571
            M  P+VFFDMTVGG PAGRIVMEL+A+  P+TAENFRALCTGEKGVGKSGKPLHYKGS+FHRVIP FMCQ            ESIYG KF DE FV+K   PG+LSMANAGP TNGSQFF+CT  T WLDGKHVVFGQVVEGMDVVKAIEKVG+ +G T+K V +ADCGQLS
Sbjct:    1 MANPRVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
BLAST of CF838755 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 2.633e-67
Identity = 120/171 (70.18%), Postives = 136/171 (79.53%), Query Frame = 2
Query:   56 MKXPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 568
            M  PKVFFD+ +G   AGR+VMELFADVTPRTA NFRALCTGE G+GK+GK LHYKGS+FHR+IPGFMCQ            ESIYGSKF DENF  KHTGPGILSMAN+GP TNGSQFF+CT KT WLDGKHVVFG+VV+G +VVKA+E VGS  G  ++ VVI DCG+L
Sbjct:    1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171          
The following BLAST results are available for this feature:
BLAST of CF838755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 232
Match NameE-valueIdentityDescription
CYPH_CATRO9.322e-8183.72Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC5.115e-7981.29Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU1.393e-7677.33Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP18C_ARATH1.540e-7577.91Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CP19B_ARATH2.627e-7577.51Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP19A_ARATH2.627e-7578.70Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CYPH_BRANA6.056e-7276.02Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18D_ARATH6.056e-7274.42Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYPH_MAIZE5.127e-7174.42Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CP19C_ARATH2.633e-6770.18Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06H24_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838755 ID=CF838755; Name=CF838755; organism=Citrus sinensis; type=EST; length=588bp
CAAATCAGAACCCTTTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAAT
CACTTATGAAAAANCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAG
CCGGCCGGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAAC
CGCCGAGAACTTCCGCGCCCTCTGCACCGGCGAGAAAGGCGTCGGCAAGT
CCGGCAAGCCTCTCCACTACAAAGGCTCGTCCTTCCACCGTGTGATCCCC
GGATTCATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGG
CGAATCAATCTACGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGC
ACACCGGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAAC
GGATCTCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAA
GCACGTTGTGTTCGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCA
TCGAGAAAGTGGGGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGTGATC
GCTGATTGCGGTCAATTGTCTTAGATTTGATCATGATA
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