CF838766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838766 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.552e-16 Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 1 SGGNVLHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVNPGMGHSFYL 405 SGGN++H VA RA + S + V G I ++P F ER++SE +T+ D + LP D+ HP P GP + ++GL P L+ VAG DLI+D +++Y E +KKAG++V+LL FYL Sbjct: 190 SGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYL 321
BLAST of CF838766 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15 Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 1 SGGNVLHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVNPGMGHSFYL 405 SGGN+ H VA RAG++ + V G I ++P F ER++SE +T+ D + LP D+ HP P P ++G+ P L+ VAG DLI+D ++ Y E +KKAG++V+L+ FYL Sbjct: 192 SGGNIAHNVALRAGESGID---VLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYL 323
BLAST of CF838766 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 1 SGGNVLHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELL 372 SGGN+ H VA RA + + +V G I +HP F QER++SE +T+ D + LP D+ HP P GP + G+ P L+ VAG DL++D ++ Y + +KK G +V LL Sbjct: 192 SGGNIAHNVAVRATNEGV---KVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLL 312
BLAST of CF838766 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.349e-11 Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 1 SGGNVLHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVNPGMGHSFYL 405 SGGN+ H VA RA D + +V G I ++ F ER++SE +TL D + LP ++D+ HP P GP + GL L+ V+G DL D ++ Y +A+++ G V+++ FYL Sbjct: 199 SGGNIAHHVAVRAADEGV---KVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYL 330 The following BLAST results are available for this feature:
BLAST of CF838766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838766 ID=CF838766; Name=CF838766; organism=Citrus sinensis; type=EST; length=759bpback to top |