CF838769

Overview
NameCF838769
Unique NameCF838769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:459..1317. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 429.483 bits (1103), Expect = 1.184e-119
Identity = 197/249 (79.12%), Postives = 226/249 (90.76%), Query Frame = 1
Query:   16 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 762
            +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFEY LK GG+ +E+DYPYTG DG +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVDSMVS+VAA  +T++
Sbjct:  119 KLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATVSTTA 367          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 429.483 bits (1103), Expect = 1.184e-119
Identity = 197/248 (79.44%), Postives = 224/248 (90.32%), Query Frame = 1
Query:   16 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 759
            +LP DA +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK GG+ REKDYPYTGTDGGSCK D+SKI A+VSNFSV+S +EDQ+AANL+K+GPLAV INA +MQTYIGGVSCPYIC + L+HGVL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDS+VS+VAA  TTS
Sbjct:  116 KLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAA--TTS 361          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 4.210e-117
Identity = 194/249 (77.91%), Postives = 222/249 (89.16%), Query Frame = 1
Query:    1 LNRPLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 744
            L + LRLPA AQKAPILPT +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D GSCKFDKSK+ A+VSNFSV++ DEDQ+AANLVK+GPLAV INA WMQTY+ GVSCPY+C K  LDHGVL+VG+G   +APIR KEKPYWIIKNSWG+NWGE GYYKIC GRNVCGVDSMVS+VAA
Sbjct:  111 LKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD-GSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAA 358          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 1.268e-113
Identity = 187/249 (75.10%), Postives = 216/249 (86.75%), Query Frame = 1
Query:   19 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 756
            L   A +AP+LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E  SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+DG  CKFDKSKI A+V NFSV+S DE Q++ANL+KHGPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+VGYG+SGFAPIR K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVDSMVS+V+A+H +
Sbjct:  122 LGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG-KCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSAVHAS 369          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 8.901e-67
Identity = 122/227 (53.74%), Postives = 151/227 (66.52%), Query Frame = 1
Query:   58 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 735
            N +PT FDWR  GAVT VK+QG CGSCWSFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ YI+K GG++ E  YPYT   G  C F+ + I A +SNF++I  +E  MA  +V  GPLA+  +AV  Q YIGGV         LDHG+LIVGY +     I  K  PYWI+KNSWG +WGE GY  +  G+N CGV + VS+
Sbjct:  116 NSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVST 340          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 1.021e-54
Identity = 113/243 (46.50%), Postives = 151/243 (62.14%), Query Frame = 1
Query:   25 ADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 735
            A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I   GG+E E +YPY       C F+++     V+ F  +   +E  M   L+ +GP+++GINA  MQ Y GGVS P+  +C  K LDHGVL+VGYG S + P   K  PYWI+KNSWG  WGE GYY++  G N CGV  M +S
Sbjct:  379 ATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKK-NQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATS 610          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.601e-53
Identity = 104/229 (45.41%), Postives = 148/229 (64.63%), Query Frame = 1
Query:   58 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 735
            N++P +FDWR+ GAVT VK+QG CGSCW+FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I+K GG+  E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+ +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGENGY+++  G   CG++++ +S
Sbjct:  103 NNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKN-EKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATS 315          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.942e-51
Identity = 107/233 (45.92%), Postives = 144/233 (61.80%), Query Frame = 1
Query:   64 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 732
            LP + DWR +GAV  VKDQG CGSCW+FSA GA+EG + ++TGEL+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K GG+E ++DYPY   D G C  DK+     V+   +  +  D+++     V H P++V I A     Q Y  GV     CG  LDHGV++VGYGS+         + YWII+NSWG NWG++GY K  + RN+      CG+  M S
Sbjct:  130 LPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTG-TCGISLDHGVVVVGYGST-------SGEDYWIIRNSWGLNWGDSGYVK--LQRNIDDPFGKCGIAMMPS 345          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.942e-51
Identity = 108/223 (48.43%), Postives = 137/223 (61.43%), Query Frame = 1
Query:   64 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 717
            +P   DWR+HGAVTGVKDQG CGSCW+FS+TGALEG HF   G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI   GG++ EK YPY G D  SC F+K+ I A  + F  +   DE++M   +   GP++V I+A     Q Y  GV     C +  LDHGVL+VGYG+            YW++KNSWG  WGE GY K+   + N CG+
Sbjct:  122 VPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGID-DSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDE------SGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGI 330          
BLAST of CF838769 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.525e-50
Identity = 105/226 (46.46%), Postives = 137/226 (60.62%), Query Frame = 1
Query:   67 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 735
            P ++DWR  GAVT VKDQG CGSCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  G   CGV++M SS
Sbjct:  272 PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASS 480          
The following BLAST results are available for this feature:
BLAST of CF838769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
RD19A_ARATH1.184e-11979.12Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH1.184e-11979.44Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP_PEA4.210e-11777.91Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CYSP1_MAIZE1.268e-11375.10Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI8.901e-6753.74Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CPR1_DROME1.021e-5446.50Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATL_SCHMA5.601e-5345.41Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CPR1_ARATH8.942e-5145.92Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATL_SARPE8.942e-5148.43Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATF_HUMAN1.525e-5046.46Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06I22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838769 ID=CF838769; Name=CF838769; organism=Citrus sinensis; type=EST; length=859bp
TTGAATAGGCCCCTTCGGCTACCAGCTGACGCTCAAAAGGCTCCTATCCT
CCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCG
TTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCGTTTAGT
GCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGT
CAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAG
AGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCT
GCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAAGGACTA
CCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAA
TTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAA
ATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGC
CGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACATTTGCG
GGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGGATCCTCAGGT
TTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCATAAAGAACTC
CTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTC
GCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGCTGCTATCCAT
ACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTC
TGTACCTAGATATTATAGGATATCCTTTTTAATATCCGTCTGCAATTATA
ACGATGCCT
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