CF838775

Overview
NameCF838775
Unique NameCF838775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5224 contig Csv1_Contig5224:7..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 449.899 bits (1156), Expect = 7.749e-126
Identity = 226/240 (94.17%), Postives = 234/240 (97.50%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MVKFTA+ LR IMD KHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYY+MTD+AL+SYKGER GN+YLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAY TF +V+ENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTL+NFAKMYASKFGVDESKM
Sbjct:    1 MVKFTADELRAIMDCKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYQMTDEALQSYKGERKGNDYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYTTFQKVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLSNFAKMYASKFGVDESKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.344e-106
Identity = 191/240 (79.58%), Postives = 213/240 (88.75%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MVKFT + +R +M++++NIRNMSVIAHVDHGKSTLTDSLVAAAGIIA E AGD R+TDTRADE ERGITIKSTGISLYY+MTD+ LK + GER GN++LINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLT+NK+DRCFLEL +D EEAY  + RV+ENANVIMATY D  LGD Q +PE GTV+FSAGLHGWAFTLT FA MYA+KFG D  +M
Sbjct:    1 MVKFTIDQIRGLMEYQNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAFEQAGDQRLTDTRADEQERGITIKSTGISLYYQMTDEQLKGFTGERQGNDFLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTINKIDRCFLELMLDPEEAYLAYRRVIENANVIMATYADEHLGDTQTHPEAGTVSFSAGLHGWAFTLTVFANMYAAKFGTDTKRM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.882e-93
Identity = 170/240 (70.83%), Postives = 198/240 (82.50%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT + +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISLY EM+D+ +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD IEGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQTF+R VE+ NVI++TY D +LGDVQVYP +GTVAF +GLHGWAFT+  FA  YA KFGVD++KM
Sbjct:    1 MVAFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 339.732 bits (870), Expect = 1.129e-92
Identity = 168/240 (70.00%), Postives = 196/240 (81.67%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT E +R +M    N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AGD R  DTRADE ERG+TIKST ISL+ EMTDD +K  K   +G ++L+NLIDSPGHVDFSSEVTAALR+TDGALVVVD IEGVCVQTETVLRQALGERIRPV+ VNK+DR  LELQ+  EE YQ F+RVVE+ NV+++TY D +LGD QV+P+KGTVAF++GLHGWAFT+  FA  YA KFG+D +KM
Sbjct:    1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAEMTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYDKVLGDCQVFPDKGTVAFASGLHGWAFTVRQFANRYAKKFGIDRNKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.475e-92
Identity = 171/240 (71.25%), Postives = 194/240 (80.83%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT E +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R  DTR DE ERGITIKST ISLY  M DD +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PVL VNK+DR  LELQV  E+ YQTF+R VE+ NVI++TY DP LGD QVYP+KGTVAF +GLHGWAFT+  FA  Y+ KFGVD +KM
Sbjct:    1 MVAFTIEQIRDLMDKVANVRNMSVIAHVDHGKSTLTDSLVQRAGIISAGKAGEARFMDTRKDEQERGITIKSTAISLYASMDDDDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVLVVNKVDRALLELQVSKEDLYQTFARTVESVNVIISTYVDPALGDAQVYPDKGTVAFGSGLHGWAFTVRQFALRYSKKFGVDRAKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.475e-92
Identity = 168/240 (70.00%), Postives = 197/240 (82.08%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT E +R +MD   N+RNMSVIAHVDHGKSTL+DSLV  AGII+   AGD R  DTR DE ERGITIKST ISLY  MTD+ +K  K + +GN +L+NLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQ   E+ YQTF+R VE+ NVI++TY DP+LGDVQVYP+KGTVAF++GLHGWAFT+  FA  Y+ KFGVD+ KM
Sbjct:    1 MVAFTIEQIRGLMDKVTNVRNMSVIAHVDHGKSTLSDSLVQKAGIISAAKAGDARFMDTRKDEQERGITIKSTAISLYASMTDEDVKDIKQKTDGNSFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQTTKEDLYQTFARTVESVNVIISTYCDPVLGDVQVYPQKGTVAFASGLHGWAFTVRQFANKYSKKFGVDKEKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.926e-92
Identity = 169/240 (70.42%), Postives = 195/240 (81.25%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT + +R +MD   NIRNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISL+ EM+DD +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ VNK+DR  LELQV  E+ YQ+F+R VE+ NVI++TY D +LGDVQVYP KGT+AF +GLHGWAFT+  FA  Y+ KFGVD  KM
Sbjct:    1 MVAFTVDQIRSLMDKVTNIRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSDDDVKDIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVCVNKVDRALLELQVSKEDLYQSFARTVESVNVIISTYADEVLGDVQVYPSKGTIAFGSGLHGWAFTIRQFANRYSKKFGVDREKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.516e-92
Identity = 168/240 (70.00%), Postives = 194/240 (80.83%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT + +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISLY EM DD +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+F+R VE+ NV++ATY D  +GD QVYPE+GTVAF +GLHGWAFT+  FA  Y+ KFGVD  KM
Sbjct:    1 MVNFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMGDDDVKEIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVTKEDLYQSFARTVESVNVVIATYTDKTIGDNQVYPEQGTVAFGSGLHGWAFTVRQFATRYSKKFGVDRIKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 4.292e-92
Identity = 167/240 (69.58%), Postives = 196/240 (81.67%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT + +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISL+ EM+++ +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVD +EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+FSR VE+ NVI++TY D +LGDVQVYP+KGTVAF +GLHGWAFT+  FA  Y+ KFGVD  KM
Sbjct:    1 MVAFTVDQIRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSEEDVKDIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQSFSRTVESVNVIISTYADEVLGDVQVYPQKGTVAFGSGLHGWAFTIRQFANRYSKKFGVDREKM 240
[Close]
BLAST of CF838775 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 7.320e-92
Identity = 169/240 (70.42%), Postives = 193/240 (80.42%), Query Frame = 2 
Query:   92 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVVENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKM 811
            MV FT E +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISLY  MTDD  K  + +  GN +LINLIDSPGHVDFSSEVTAALR+TDGALVVVDC+EGVCVQTETVLRQALGERI+PV+ +NK+DR  LELQV  E+ YQ+FSR +E+ NVI++TY D  LGD QVYP+KGTVAF +GLHGWAFT+  FA  Y+ KFGVD  KM
Sbjct:    1 MVAFTIEQIRELMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYASMTDDDCKEIQQKTVGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALGERIKPVVIINKVDRALLELQVTKEDLYQSFSRTIESVNVIISTYVDSSLGDSQVYPDKGTVAFGSGLHGWAFTVRQFATRYSKKFGVDRIKM 240
The following BLAST results are available for this feature:
BLAST of CF838775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_BETVU7.749e-12694.17Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE2.344e-10679.58Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_YEAST3.882e-9370.83Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_SCHPO1.129e-9270.00Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_PICGU1.475e-9271.25Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_CANAL1.475e-9270.00Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_SACKL1.926e-9270.42Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_PICPA2.516e-9270.00Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_ASHGO4.292e-9269.58Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_DEBHA7.320e-9270.42Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06J04_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838775 ID=CF838775; Name=CF838775; organism=Citrus sinensis; type=EST; length=812bp
CTAAACAGAGCCCTTTCGTTTTCTTTTGGTTATACCCCTTGCAAGCTAAA
CCAACAAACAAAAGCTTGCCAGTTTTTCTTAACAAGTCAAGATGGTGAAG
TTTACAGCTGAGGGACTCCGTAGGATTATGGACTTCAAACATAACATCCG
TAATATGTCTGTGATTGCTCATGTCGATCATGGGAAATCAACTCTTACAG
ACTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAGGTTGCTGGTGAT
GTGCGTATGACAGATACTCGTGCTGATGAAGCTGAGCGTGGTATTACAAT
CAAGTCTACTGGTATCTCTCTCTACTATGAGATGACTGATGATGCCCTGA
AGAGCTACAAGGGAGAACGTAATGGGAATGAGTACCTGATCAATCTTATT
GATTCCCCTGGGCACGTTGACTTCTCATCTGAGGTGACAGCTGCTCTTCG
TATAACTGATGGTGCCCTTGTTGTGGTGGATTGTATTGAGGGTGTCTGTG
TGCAAACGGAAACTGTGCTTAGACAAGCCTTGGGTGAGAGGATTAGGCCA
GTCTTGACTGTGAATAAGATGGATAGGTGCTTTCTTGAGCTCCAGGTTGA
TGGAGAGGAGGCTTACCAGACTTTCTCCAGAGTGGTTGAGAATGCTAATG
TCATTATGGCTACCTATGAAGATCCACTCCTGGGGGATGTTCAAGTATAC
CCTGAGAAAGGAACCGTTGCTTTCTCAGCTGGTTTGCATGGCTGGGCTTT
TACTTTGACCAACTTTGCTAAGATGTATGCATCAAAATTTGGAGTCGATG
AGTCTAAGATGA
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