CF838787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32 Identity = 65/88 (73.86%), Postives = 72/88 (81.82%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PEDD RHA TATFT++D+QIPLSGPNSI+GRAVVVHA+PDDLG+GGHELSKTTGNAGGRVACGIIGLQG Sbjct: 65 PNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 6.328e-32 Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PED+ RHA TATFT++D+QIPL+GPNSI+GRAVVVHADPDDLG+GGHELSK TGNAGGRVACG+IGLQG Sbjct: 65 PAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.405e-31 Identity = 63/88 (71.59%), Postives = 69/88 (78.41%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PED+NRHA TA+FT+ D QIPL+GP SIIGR VVVHADPDDLGKGGHEL+KTTGNAGGRVACGIIGLQG Sbjct: 65 PAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHADPDDLGKGGHELTKTTGNAGGRVACGIIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 3.141e-31 Identity = 64/88 (72.73%), Postives = 69/88 (78.41%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K HG PED NRHA TATFT+ D+QIPLSGPNSI+GRA+VVHADPDDLGKGGHELS +TGNAGGRVACGIIGLQG Sbjct: 65 PDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGGHELSLSTGNAGGRVACGIIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_NICPL (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia GN=SODCC PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 6.997e-31 Identity = 64/88 (72.73%), Postives = 69/88 (78.41%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PED+ RHA TA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 65 PAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.997e-31 Identity = 61/88 (69.32%), Postives = 70/88 (79.55%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PEDD RHA +F+++D+QIPL+GPNSI+GRAVVVHADPDDLGKGGHELSKTTGNAGGRVACG+IGLQG Sbjct: 65 PAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGVIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 9.138e-31 Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K HG PED NRHA TATFT+ D+QIPL GPNSI+GRAVVVHA+PDDLGKGGHELS TTGNAGGRVACGIIGLQG Sbjct: 65 PEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.193e-30 Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PED+ RHA A VVD+QIPL+GPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 65 PAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 1.193e-30 Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PED+ RHA A VVD+QIPL+GPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 65 PAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 1.559e-30 Identity = 63/88 (71.59%), Postives = 68/88 (77.27%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 279 P K+HG PED+ RHA T +FT+ DN IPL+G NSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG Sbjct: 65 PNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 152 The following BLAST results are available for this feature:
BLAST of CF838787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838787 ID=CF838787; Name=CF838787; organism=Citrus sinensis; type=EST; length=429bpback to top |