CF838826

Overview
NameCF838826
Unique NameCF838826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838826 vs. ExPASy Swiss-Prot
Match: BZR2_ARATH (Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.027e-68
Identity = 156/284 (54.93%), Postives = 175/284 (61.62%), Query Frame = 3
Query:   72 MTSDGATSTSAA--------RRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTXXXXXXXXXXXXXXXXXXXXXXXXXTR---------GDANNPSSLLPFLRN-AIPSSLPPLRISNSA--XXXXXXXXXXXXXXXXNWESM--------AKESMSALNYPFYAISAPASPI-HRQLYAPAATIHECDESDTSTVDSGHWISFKKFAP----SASGVPTSPTFNLVRHVAQ 824
            MTSDGATSTSAA        RRKP+W              A+AAKIYTGLRAQGNYNLPKHCDNNEVLKALC+EAGWVVEEDGTTYRKG +P P D+A +S+R T                         +          GD +N S++ PFLRN  IPSSLPPLRISNSA                   WES         AK+SM++LNYPFYA+SAPASP  HRQ +AP ATI ECDESD+STVDSGHWISF+KFA     SAS VPTSPTFNLV+   Q
Sbjct:    1 MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFDSPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSSPTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAP-ATIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQ 283          
BLAST of CF838826 vs. ExPASy Swiss-Prot
Match: BZR1_ARATH (Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.242e-67
Identity = 153/284 (53.87%), Postives = 171/284 (60.21%), Query Frame = 3
Query:   72 MTSDGATSTSAA---------RRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVT--------XXXXXXXXXXXXXXXXXXXXXXXXXTRGDANN--PSSLLPFLRN-AIPSSLPPLRISNS--AXXXXXXXXXXXXXXXXNWES-------MAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFKKFAP----SASGVPTSPTFNLVRHVAQ 824
            MTSDGATSTSAA         RRKP+W              A+AAKIYTGLRAQG+YNLPKHCDNNEVLKALC EAGWVVEEDGTTYRKG +P P +IA TS+RVT                                 +RG+ NN   S+  PFLRN  IPSSLP LRISNS                   NWES       +AK+SM++ NYPFYA+SAPASP HR  +   ATI ECDESD+STVDSGHWISF+KFA     SAS VPTSPTFNLV+   Q
Sbjct:    1 MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAFQSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPVSSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPECDESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQ 284          
BLAST of CF838826 vs. ExPASy Swiss-Prot
Match: BEH2_ARATH (BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.666e-44
Identity = 114/263 (43.35%), Postives = 139/263 (52.85%), Query Frame = 3
Query:   84 GATSTSAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIAST--------SARVTXXXXXXXXXXXXXXXXXXXXXXXXXTRGDANNPSS--LLPFLRN---AIPSSLPPLRISNSAXXXXXXXXXXXXXXXXNWESMAKE---SMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTV-DSGHWISFKKFAPSASGVPTSPTFNLVRHVA 821
            G    S++ R PTW              AI AKIY+GLRAQGNY LPKHCDNNEVLKALC EAGW+VE+DGTTYRKG +PP  DI+ T        S + +                         +R D  NPSS  LLPFL N   +IP++LPPLRISNSA                   S       S+  L +P +AISAP+SP  R  +    TI ECDES+  ++ DSG WI+F+      S  PTSPTFNLV+  +
Sbjct:    7 GGGGGSSSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRKGFKPPASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSRYD-GNPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKLTSEQLPNGGSLHVLRHPLFAISAPSSPTRRAGHQTPPTIPECDESEEDSIEDSGRWINFQ------STAPTSPTFNLVQQTS 262          
BLAST of CF838826 vs. ExPASy Swiss-Prot
Match: BEH1_ARATH (BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana GN=BEH1 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.618e-41
Identity = 108/249 (43.37%), Postives = 133/249 (53.41%), Query Frame = 3
Query:   72 MTSDGATSTSAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTXXXXXXXXXXXXXXXXXXXXXXXXXTRGDANNPSS-LLPFLRN-AIPSSLPPLRISNSA-XXXXXXXXXXXXXXXXNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFKKFAPSASGVPTSPTFNLV 809
            MT+ G  ST+A  R PTW              AIAAKI+TGLR+QGNY LPKHCDNNEVLKALC EAGW+V EDGTTYRKG+RP    +  +S +++                         TR D N  S+ L+P+L+N A   +L PLRISNSA                  W+S         N+P   +SAP+SP  R  +    +I ECDESD STVDS  W +F+    S +  P SPTFNLV
Sbjct:    1 MTASGGGSTAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPTETTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYPSPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNPRLPRWQSS--------NFP---VSAPSSPTRRLHH--YTSIPECDESDVSTVDSCRWGNFQSVNVSQT-CPPSPTFNLV 235          
BLAST of CF838826 vs. ExPASy Swiss-Prot
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.142e-21
Identity = 63/143 (44.06%), Postives = 74/143 (51.75%), Query Frame = 3
Query:   99 SAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRP-PPIDI--ASTSARVTXXXXXXXXXXXXXXXXXXXXXXXXXTRGDANNPSSLLPFLRNA---IPSSLP 509
            ++  R PTW              AIAAKI+ GLR  GN+ LPKHCDNNEVLKALC EAGW VE+DGTTYRKG +P   +D+   STSA                              GDAN   SL+P+L+N     PS LP
Sbjct:    2 TSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPTNPFGDAN---SLIPWLKNLSSNSPSKLP 141          
BLAST of CF838826 vs. ExPASy Swiss-Prot
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.574e-20
Identity = 47/76 (61.84%), Postives = 51/76 (67.11%), Query Frame = 3
Query:   99 SAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPP 326
            ++  R PTW              AIAAKI+TGLR  GNY LPKHCDNNEVLKALC EAGW+VE DGTTYRKG   P
Sbjct:    2 TSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYRKGCSRP 77          
The following BLAST results are available for this feature:
BLAST of CF838826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BZR2_ARATH2.027e-6854.93Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis th... [more]
BZR1_ARATH2.242e-6753.87Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis th... [more]
BEH2_ARATH2.666e-4443.35BES1/BZR1 homolog protein 2 OS=Arabidopsis thalian... [more]
BEH1_ARATH1.618e-4143.37BES1/BZR1 homolog protein 1 OS=Arabidopsis thalian... [more]
BEH3_ARATH4.142e-2144.06BES1/BZR1 homolog protein 3 OS=Arabidopsis thalian... [more]
BEH4_ARATH1.574e-2061.84BES1/BZR1 homolog protein 4 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_06L12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838826 ID=CF838826; Name=CF838826; organism=Citrus sinensis; type=EST; length=833bp
CGAAGGGAAACCTTTTTCCTCGTGGCCATTTTAGCCTTTTAGGTCTAGAG
CCCTTTGGGNTTCGTCGGAAAATGACGTCAGACGGTGCCACATCGACGTC
GGCAGCTCGGAGGAAGCCGACGTGGAGGGAGAGGGAGAACAATAGGAGGA
GAGAGAGAAGGAGAAGAGCTATAGCCGCTAAGATTTACACTGGGTTGAGG
GCTCAGGGAAACTATAATTTGCCCAAGCACTGTGATAATAATGAAGTTTT
GAAAGCTCTATGTGCAGAAGCTGGCTGGGTTGTTGAGGAAGACGGCACCA
CTTATCGCAAAGGAACGAGGCCTCCTCCTATTGATATAGCAAGTACTTCA
GCCAGAGTTACCCCTTACTCTTCCCAGAATCCAAGTCCTTTATCTTCATC
CTTTCCGAGCCCAGTTCCATCATATCCGACTAGTCCTACTCGTGGTGATG
CCAACAACCCATCTAGCCTCCTCCCGTTCCTCCGAAATGCAATCCCTTCA
TCACTTCCTCCTCTTCGGATCTCAAACAGTGCCCCAGTGACTCCACCCTT
GTCATCCCCTACAAAAAGTAAACCAATTCCCAATTGGGAGTCTATGGCCA
AAGAATCCATGTCTGCCCTCAATTACCCTTTCTACGCTATTTCTGCCCCA
GCTAGTCCAATTCACCGTCAACTGTATGCTCCAGCAGCTACGATACATGA
ATGCGATGAATCTGATACATCCACTGTTGACTCTGGTCACTGGATAAGCT
TCAAAAAATTTGCACCTTCTGCTTCTGGGGTGCCAACCTCTCCAACCTTC
AATCTTGTAAGACATGTGGCTCAACCAAGTTTT
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