CF838907

Overview
NameCF838907
Unique NameCF838907
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.725e-49
Identity = 106/240 (44.17%), Postives = 155/240 (64.58%), Query Frame = 2
Query:   35 KVVCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV--TFGWVNVKDVANAHIQAF 739
            + VCVT ASG+I SWLV  LL R  TV+A+VRDP + KK +HLL L  A   L L+KA+L +EGSFD  + GC GV H A+P   ++KDP+ E++ P ++G L ++ SCA   +++R+V TSS A  +N  + + P  V DE+ +SD E C+  ++  W Y +SKTLAE AAWK+AKE +ID +TI P +V+GP +  ++  S    LS I G + + ++     +V++ D+ NAHI  F
Sbjct:    6 ETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSS-AGTVNIQEHQLP--VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLF 242          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.942e-49
Identity = 106/238 (44.54%), Postives = 155/238 (65.13%), Query Frame = 2
Query:   41 VCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLS-LIKGAQTYPNVTFG-WVNVKDVANAHIQAF 739
            VCVT ASG+I SWLV  LL  GYTV+A+VRDP + KK +HLL L  A   L L+KA+L +EGSFD  + GC GV H A+P   ++KDP+ E++ P + G L++L +C K  +++++V TSS A  +N  + + P  V DE+ +SD E C+  ++  W Y +SKTLAE AAWK+AKE +ID +TI P +VIGP L P++  S    LS +++    Y  +  G +V++ D+  +HI  +
Sbjct:    8 VCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSS-AGTVNVEEHQKP--VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLY 242          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.554e-49
Identity = 105/238 (44.12%), Postives = 155/238 (65.13%), Query Frame = 2
Query:   41 VCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLS-LIKGAQTYPNVTFG-WVNVKDVANAHIQAF 739
            VCVT ASG+I SWLV  LL  GYTV+A+VRDP + KK +HLL L  A   L L+KA+L +EGSFD  + GC GV H A+P   +++DP+ E++ P + G L++L +C K  +++++V TSS A  +N  + + P  V DE+ +SD E C+  ++  W Y +SKTLAE AAWK+AKE +ID +TI P +VIGP L P++  S    LS +++    Y  +  G +V++ D+  +HI  +
Sbjct:    8 VCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSS-AGTVNVEEHQKP--VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLY 242          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.491e-48
Identity = 105/235 (44.68%), Postives = 154/235 (65.53%), Query Frame = 2
Query:   41 VCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPE--VCKQSELW-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV--TFGWVNVKDVANAHI 730
            VCVT A+G+I SWLV  LL RGY V+A+VR+P D KK +HLL L  A   L L+KA+L +EGSFD  ++GC GV H A+P   ++KDP+ E++ P ++G L+++ SCAK  ++K++V TSS A  +N  + + P  V DE+ +SD +    K+   W Y +SKTLAE AA + AKE +ID V+I P +V+GP + PT   S    LSLI GA+++ ++     +V++ D+   HI
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSS-AGTVNVQETQLP--VYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAESHYSIIKQGQYVHLDDLCECHI 240          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.976e-46
Identity = 104/238 (43.70%), Postives = 153/238 (64.29%), Query Frame = 2
Query:   32 GKVVCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQT-YPNVTFG-WVNVKDVANAHI 730
            G+ VCVT ASG+I SWL+  LL RGYTV+A+VRDP++ KK +HLL L  A   L L+KA+L EEGSFD+ VDGC GV H A+P   ++KDP+ E++ P + G L++L SC K   ++RVV TSS    +N    + P  V DET +S  +  +  ++  W Y +SK LAE AAWK+A E +++ ++I P +V+GP + P++  S    LS I   ++ Y  +  G +V++ D+  +HI
Sbjct:   22 GETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVK-AKLRRVVFTSS-GGTVNVEATQKP--VYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTIIKQGQFVHLDDLCMSHI 255          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.157e-45
Identity = 104/237 (43.88%), Postives = 150/237 (63.29%), Query Frame = 2
Query:   35 KVVCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPE--VCKQSELW-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLS-LIKGAQTYPNVTFG-WVNVKDVANAHI 730
            + VCVT ASG+I SWLV  LL RGY V+A+VRDP + KK +HLL L  A   L L+KA+L EEGS+D  ++GCDGV H A+P   ++KDP+ E++ P V G L ++ +C K  +++R V TSS A  +N  + +    V DE  +SD E  + K+   W Y +SKTLAE AAW FA+EK +D ++I P +V+GP +  ++  S    LS + +    Y  +  G +V++ D+ NAHI
Sbjct:    6 ETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSS-AGTVNVEEHQKN--VYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHI 239          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.794e-45
Identity = 99/238 (41.60%), Postives = 143/238 (60.08%), Query Frame = 2
Query:   41 VCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPE--VCKQSELW-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV--TFGWVNVKDVANAHIQAF 739
            VCVT A+G+I SWLV  LL RGY V A+VRDP D KK +HLL L  A   L+L+KA+L +EGSFD  + GC GV H A+P   ++KDP+ E++ P ++G L+++ SC K  ++K++V TSS   V    K      V DE+ +SD +    K+   W Y +SKTLAE AAW   K  +I  ++I P +V+GP +  T   S    LSLI G + + ++     +V++ D+   HI  +
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTVNGQEKQLH---VYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLY 243          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.671e-44
Identity = 104/235 (44.26%), Postives = 147/235 (62.55%), Query Frame = 2
Query:   41 VCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVC---KQSELWYPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQT-YPNVTFG-WVNVKDVANAHI 730
            VCVT A+G+I SWLV  LL RGY V A+VRDP + KK +HLL L  A   L L+KA+L  EGSFD  + GC GV H A+P   ++KDP+ E++ P V+G L+++ SCAK  ++KR+V TSS A  L+  + +   +  D+T +SD +     K +   Y  SK LAE AA + AK+K+ID ++I P +V+GP + PT   S    LSLI G +  Y  +  G +V++ D+  AHI
Sbjct:   18 VCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSS-AGTLDVQEQQ--KLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHI 249          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.019e-43
Identity = 91/207 (43.96%), Postives = 136/207 (65.70%), Query Frame = 2
Query:   74 SWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV 685
            SWLV  L+  GY V+A+VRDP + KK   LL L GA  +L ++KA+L EEGSFD  + GC GV H A+P   ++KDP+ E++ P +KG L+++ +C K  +++R++ TSS A  LN  + + P  + DE+ +SD E C++ ++  W Y +SKTLAE  AWKFAKE  +D++TI P +V+GP L PT+  S    LS I G + + ++
Sbjct:    2 SWLVMRLMEPGYMVRATVRDPENLKKVSPLLELPGAKSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFESKDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSS-AGTLNVTEDQKP--LWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIPTMPPSLITALSPITGNEAHYSI 205          
BLAST of CF838907 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.019e-43
Identity = 97/250 (38.80%), Postives = 147/250 (58.80%), Query Frame = 2
Query:    5 TMTIVAAAAGKVVCVTRASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKTLAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTYPNV--TFGWVNVKDVANAHIQAF 739
            T +  A  +   VCVT A+G+I SWLV  LL RGYTV+A+VRDP + KK +HL+ L  A   L L+KA++  EGSFD  + GC+GV H A+    D+ DP+ E++ P + G LN++ SC +  ++K+ + T+S    +N  + + P  V DET  SD +     ++  W Y +SK LAE A  + AKE +ID ++I P +V+GP + PT   S    LS I G + + ++     +V++ D+   HI  F
Sbjct:    8 TSSETAPPSSTTVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTVEGSFDEAIQGCEGVFHLATSMEFDSVDPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTS-GGTVNVEEHQKP--VYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSIIKQCQYVHLDDLCEGHIFLF 254          
The following BLAST results are available for this feature:
BLAST of CF838907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
DFRA_VITVI1.725e-4944.17Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_MALDO2.942e-4944.54Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_PYRCO6.554e-4944.12Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_CALCH2.491e-4844.68Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_DIACA3.976e-4643.70Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_ARATH1.157e-4543.88Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_GERHY9.794e-4541.60Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
DFRA_PETHY1.671e-4444.26Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_MEDSA7.019e-4343.96Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
DFRA_ANTMA7.019e-4338.80Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06P05_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838907 ID=CF838907; Name=CF838907; organism=Citrus sinensis; type=EST; length=740bp
GTTGACAATGACCATTGTAGCAGCAGCAGCGGGGAAGGTCGTATGCGTGA
CCCGAGCATCGGGTTACATAGCTTCATGGCTTGTCAAGCTTCTTCTTTCT
CGTGGCTACACTGTCAAGGCCTCTGTTCGTGATCCCAATGATCCAAAAAA
GACAAGACACTTACTTGCACTTGATGGAGCTTCGGAAAGACTTCAGTTGT
TTAAGGCAAATCTTTTGGAAGAAGGATCCTTTGATTCAATTGTTGATGGG
TGCGATGGTGTTTGCCATACTGCATCTCCCTTTTACCATGATGCCAAGGA
TCCGCAGGTGGAGTTACTTGATCCTGCTGTGAAAGGAACTCTTAATGTTC
TTAACTCATGTGCGAAGTTCCCTTCTATCAAACGAGTGGTTTTAACATCT
TCAATGGCTGCAGTTTTAAACACTGGAAAACCTCGAACCCCTGATGTGGT
AGTTGATGAGACTTGGTTCTCGGATCCGGAGGTTTGCAAGCAATCAGAGC
TCTGGTATCCACTTTCAAAGACATTGGCTGAGGATGCAGCTTGGAAATTT
GCAAAGGAGAAGAGTATTGACTTGGTTACCATTAACCCGGCAATGGTTAT
TGGTCCTCTCTTACAGCCAACACTTAACACAAGTGCTGCTGCAGTTCTAA
GCTTAATTAAAGGAGCACAAACTTACCCAAATGTAACTTTTGGATGGGTT
AACGTTAAAGATGTTGCCAATGCACATATTCAAGCATTTG
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