CF931524

Overview
NameCF931524
Unique NameCF931524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length284
Libraries
Library NameType
Mature peel (flavedo) cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13032 contig Csv1_Contig13032:121..406. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SRK2A_ARATH (Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.759e-47
Identity = 89/94 (94.68%), Postives = 92/94 (97.87%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APRLKICDFGYSKSS+LHSRPKSTVGTPAYIAPEVLSRREYDGK+ADVWSCGVTLYVMLVGAYPFEDQ+DPKNF KTIQKIMAVQ
Sbjct:  127 ENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTIQKIMAVQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SAPK4_ORYSJ (Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica GN=SAPK4 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.209e-45
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            EN LLDGS APRLKICDFGYSKSSVLHSRPKS VGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKN  KTIQ+IM+VQ
Sbjct:  127 ENVLLDGSPAPRLKICDFGYSKSSVLHSRPKSAVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNIRKTIQRIMSVQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SAPK5_ORYSJ (Serine/threonine-protein kinase SAPK5 OS=Oryza sativa subsp. japonica GN=SAPK5 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 4.595e-45
Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APRLKICDFGYSKSS+LHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFED  DPKNF KTI +IM+VQ
Sbjct:  127 ENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDPKDPKNFRKTISRIMSVQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SRK2G_ARATH (Serine/threonine-protein kinase SRK2G OS=Arabidopsis thaliana GN=SRK2G PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 7.837e-45
Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS AP LKICDFGYSKSS+LHSRPKSTVGTPAYIAPEVLSRREYDGK ADVWSCGVTLYVMLVGAYPFED +DPKNF KTIQ+IMAVQ
Sbjct:  127 ENTLLDGSPAPLLKICDFGYSKSSILHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGAYPFEDPNDPKNFRKTIQRIMAVQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.837e-45
Identity = 85/94 (90.43%), Postives = 90/94 (95.74%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APRLKICDFGYSKSS+LHS PKSTVGTPAYIAPEVLSR EYDGK+ADVWSCGVTLYVMLVGAYPFEDQ+DPKNF KTIQ+IMAV+
Sbjct:  127 ENTLLDGSPAPRLKICDFGYSKSSLLHSMPKSTVGTPAYIAPEVLSRGEYDGKMADVWSCGVTLYVMLVGAYPFEDQEDPKNFKKTIQRIMAVK 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SAPK7_ORYSJ (Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 1.337e-44
Identity = 84/94 (89.36%), Postives = 89/94 (94.68%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVLSRREYDGK ADVWSCGVTLYVMLVGAYPFED DDPKNF KTI +IM++Q
Sbjct:  127 ENTLLDGSPAPRLKICDFGYSKSSLLHSKPKSTVGTPAYIAPEVLSRREYDGKTADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIMSIQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SAPK6_ORYSJ (Serine/threonine-protein kinase SAPK6 OS=Oryza sativa subsp. japonica GN=SAPK6 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.746e-44
Identity = 83/94 (88.30%), Postives = 90/94 (95.74%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APRLKICDFGYSKSS+LHS+PKSTVGTPAYIAPEVLSRREYDGK+ADVWSCGVTLYVMLVGAYPFED DDPKNF KTI +I+++Q
Sbjct:  127 ENTLLDGSPAPRLKICDFGYSKSSLLHSKPKSTVGTPAYIAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDPDDPKNFRKTIGRIVSIQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SRK2H_ARATH (Serine/threonine-protein kinase SRK2H OS=Arabidopsis thaliana GN=SRK2H PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.280e-44
Identity = 85/94 (90.43%), Postives = 88/94 (93.62%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS AP LKICDFGYSKSS+LHSRPKSTVGTPAYIAPEVLSRREYDGK ADVWSCGVTLYVMLVG YPFED DDP+NF KTIQ+IMAVQ
Sbjct:  127 ENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQ 220          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: SAPK9_ORYSJ (Serine/threonine-protein kinase SAPK9 OS=Oryza sativa subsp. japonica GN=SAPK9 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.978e-44
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APRLKICDFGYSKSSVLHS+PKSTVGTPAYIAPEVL ++EYDGK+ADVWSCGVTLYVMLVGAYPFED +DPKNF KTIQKI+ VQ
Sbjct:  145 ENTLLDGSTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTIQKILGVQ 238          
BLAST of CF931524 vs. ExPASy Swiss-Prot
Match: AAIP_WHEAT (Abscisic acid-inducible protein kinase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.978e-44
Identity = 83/94 (88.30%), Postives = 90/94 (95.74%), Query Frame = 3
Query:    3 ENTLLDGSAAPRLKICDFGYSKSSVLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFMKTIQKIMAVQ 284
            ENTLLDGS APRLKICDFGYSKSSVLHS+PKSTVGTPAYIAPEVLSRREYDGK+ADVWSCGVTLYVMLVGAYPFED D+P+NF KTI +I++VQ
Sbjct:  117 ENTLLDGSVAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPDEPRNFRKTITRILSVQ 210          
The following BLAST results are available for this feature:
BLAST of CF931524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
SRK2A_ARATH3.759e-4794.68Serine/threonine-protein kinase SRK2A OS=Arabidops... [more]
SAPK4_ORYSJ1.209e-4592.55Serine/threonine-protein kinase SAPK4 OS=Oryza sat... [more]
SAPK5_ORYSJ4.595e-4591.49Serine/threonine-protein kinase SAPK5 OS=Oryza sat... [more]
SRK2G_ARATH7.837e-4591.49Serine/threonine-protein kinase SRK2G OS=Arabidops... [more]
SRK2B_ARATH7.837e-4590.43Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]
SAPK7_ORYSJ1.337e-4489.36Serine/threonine-protein kinase SAPK7 OS=Oryza sat... [more]
SAPK6_ORYSJ1.746e-4488.30Serine/threonine-protein kinase SAPK6 OS=Oryza sat... [more]
SRK2H_ARATH2.280e-4490.43Serine/threonine-protein kinase SRK2H OS=Arabidops... [more]
SAPK9_ORYSJ2.978e-4488.30Serine/threonine-protein kinase SAPK9 OS=Oryza sat... [more]
AAIP_WHEAT2.978e-4488.30Abscisic acid-inducible protein kinase (Fragment) ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0603 Mature peel (flavedo) cDNA subtraction library Citrus sinensis cDNA clone 6P295 similar to serine/threonine protein kinase (acc# S60611), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF931524 ID=CF931524; Name=CF931524; organism=Citrus sinensis; type=EST; length=284bp
TGGAAAATACCCTATTAGATGGAAGTGCTGCCCCACGCCTGAAAATATGT
GACTTTGGTTACTCTAAGTCATCTGTATTGCATTCAAGACCCAAATCAAC
AGTTGGAACTCCGGCTTATATAGCACCAGAAGTTCTTTCTCGGAGAGAAT
ATGATGGAAAATTAGCAGATGTATGGTCATGTGGGGTCACTCTCTATGTT
ATGCTAGTTGGTGCATACCCTTTTGAAGACCAAGATGACCCTAAAAATTT
CATGAAAACAATTCAGAAAATAATGGCAGTTCAG
back to top