CK701926

Overview
NameCK701926
Unique NameCK701926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length346
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthetase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.505e-45
Identity = 91/115 (79.13%), Postives = 97/115 (84.35%), Query Frame = 2
Query:    2 KVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNEL 346
            KVITSAIPD VGEKLIGLVTSR+EIP             PRGSNKLVSQIKEST+IPVLGHADGICHVYVDKSAN+D+AK IV+DAK DYPAACNAMETLLVHKDLA NG LN+L
Sbjct:  447 KVITSAIPDKVGEKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTRIPVLGHADGICHVYVDKSANMDMAKRIVLDAKTDYPAACNAMETLLVHKDLAENGGLNDL 561          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthetase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 8.633e-44
Identity = 89/115 (77.39%), Postives = 96/115 (83.48%), Query Frame = 2
Query:    2 KVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNEL 346
            KVITSAIP +VGE+LIGLVTSREEIP             PRGSNKLVSQIK STKIPVLGHADGICHVYVDKSA++D+AK I +DAKIDYPAACNAMETLLVHKDLA NG LN+L
Sbjct:  450 KVITSAIPVSVGERLIGLVTSREEIPELLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRITVDAKIDYPAACNAMETLLVHKDLAQNGGLNDL 564          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthetase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 8.633e-44
Identity = 88/115 (76.52%), Postives = 95/115 (82.61%), Query Frame = 2
Query:    2 KVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNEL 346
            KVITSAIP+ VG +LIGLVTSREEIP             PRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSAN+D+AK +V+DAK DYPAACNAMETLLVHKDL  NG L+EL
Sbjct:  450 KVITSAIPENVGPRLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANMDMAKKVVLDAKTDYPAACNAMETLLVHKDLVQNGCLDEL 564          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: P5CS2_ARATH (Delta-1-pyrroline-5-carboxylate synthetase B OS=Arabidopsis thaliana GN=P5CSB PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 6.187e-42
Identity = 87/115 (75.65%), Postives = 92/115 (80.00%), Query Frame = 2
Query:    2 KVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNEL 346
            KVIT AIP+TVG KLIGLVTSREEIP             PRGSNKLVSQIK STKIPVLGHADGICHVYVDKS  LD+AK IV DAK+DYPAACNAMETLLVHKDL  NG L++L
Sbjct:  450 KVITDAIPETVGGKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKNSTKIPVLGHADGICHVYVDKSGKLDMAKRIVSDAKLDYPAACNAMETLLVHKDLEQNGFLDDL 564          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: P5CS_VIGAC (Delta-1-pyrroline-5-carboxylate synthetase OS=Vigna aconitifolia PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.237e-41
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 2
Query:    2 KVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNEL 346
            KVI  AIPD VG KLIGLVTSREEIP             PRGSNKLVSQIK STKIPVLGHADGICHVYVDKSAN+++AK IV+DAK+DYPAACNAMETLL+HKDL   G L E+
Sbjct:  451 KVIIEAIPDNVGGKLIGLVTSREEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANVEMAKRIVLDAKVDYPAACNAMETLLIHKDLIEKGWLKEI 565          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthetase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.840e-41
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 2
Query:    2 KVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNEL 346
            KVIT AIP+TVG KLIGLVTSREEIP             PRGSNKLV+QIK +TKIPVLGHADGICHVYVDK+ + D+AK IV DAK+DYPAACNAMETLLVHKDL  N  LNEL
Sbjct:  450 KVITDAIPETVGGKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVTQIKNTTKIPVLGHADGICHVYVDKACDTDMAKRIVSDAKLDYPAACNAMETLLVHKDLEQNAVLNEL 564          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthetase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.200e-39
Identity = 81/115 (70.43%), Postives = 93/115 (80.87%), Query Frame = 2
Query:    2 KVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNEL 346
            KVIT AIP  VGEKLIGLVT+R+EI              PRGSNKLVSQIK STKIPVLGHADGICHVY+DKSA++D+AK+IV+DAKIDYPAACNAMETLLVHKDL  +  L+++
Sbjct:  450 KVITDAIPRNVGEKLIGLVTTRDEIADLLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYIDKSADMDMAKHIVMDAKIDYPAACNAMETLLVHKDLMKSPGLDDI 564          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: PROA_PROMT (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=proA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.454e-24
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 2
Query:   32 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA 322
            VG   + L+T+R+E               PRGSN+LV  I+E+T+IPVLGHADGICH+YVD S ++D A +I +D+KI YPAACNA+ETLL+H+D+A
Sbjct:  180 VGSGALSLLTTRQESLGLLRLDKFVNLIIPRGSNELVQFIQENTRIPVLGHADGICHLYVDNSVDIDKAISIALDSKIQYPAACNAIETLLIHEDIA 276          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: PROA_PROMP (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=proA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.454e-24
Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 2
Query:   38 EKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA 322
            E  I L+TSR++               PRGSN+LV  I+E+T+IPVLGHADGICH+Y+D   NLD+A  + +D+KI YPAACNA+ETLL+HKD A
Sbjct:  182 ENAICLLTSRKDSMAMLNLEKYINLIIPRGSNELVKFIQENTEIPVLGHADGICHLYIDNEVNLDMALKVALDSKIQYPAACNAVETLLIHKDTA 276          
BLAST of CK701926 vs. ExPASy Swiss-Prot
Match: PROA_PROM1 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=proA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.818e-24
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 2
Query:   32 VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA 322
            VG   + L+T+R+E               PRGSN+LV  I+E+T+IPVLGHADGICH+YVD S ++D A +I +D+KI YPAACNA+ETLL+H+D+A
Sbjct:  180 VGSGALSLLTTRQESLGLLRLDKFVNLIIPRGSNELVQFIQENTRIPVLGHADGICHLYVDNSVDIDKAISIALDSKIQYPAACNAIETLLIHEDVA 276          
The following BLAST results are available for this feature:
BLAST of CK701926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
P5CS_MESCR3.505e-4579.13Delta-1-pyrroline-5-carboxylate synthetase OS=Mese... [more]
P5CS_SOLLC8.633e-4477.39Delta-1-pyrroline-5-carboxylate synthetase OS=Sola... [more]
P5CS_ACTDE8.633e-4476.52Delta-1-pyrroline-5-carboxylate synthetase OS=Acti... [more]
P5CS2_ARATH6.187e-4275.65Delta-1-pyrroline-5-carboxylate synthetase B OS=Ar... [more]
P5CS_VIGAC5.237e-4173.04Delta-1-pyrroline-5-carboxylate synthetase OS=Vign... [more]
P5CS1_ARATH6.840e-4173.04Delta-1-pyrroline-5-carboxylate synthetase A OS=Ar... [more]
P5CS_ORYSJ2.200e-3970.43Delta-1-pyrroline-5-carboxylate synthetase OS=Oryz... [more]
PROA_PROMT4.454e-2453.61Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROMP4.454e-2454.74Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM15.818e-2453.61Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5187 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE43C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK701926 ID=CK701926; Name=CK701926; organism=Citrus sinensis; type=EST; length=346bp
CAAGGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAACTTATTG
GACTTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGAT
GTGATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTTGTTTCTCAAAT
CAAGGAGTCAACAAAAATTCCTGTACTAGGTCATGCTGATGGAATTTGTC
ATGTTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTT
ATTGATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCT
TCTGGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTT
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