CK702424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK702424 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.004e-19 Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 157 PQARHLRQRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVT 336 P+ +++S ++AEL+ +VISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG T Sbjct: 44 PKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKT 103 HSP 2 Score: 31.9574 bits (71), Expect = 3.004e-19 Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 2 Query: 41 ASSSLFTPSTITVRKHQISPSSISFQGLRPL 133 ++S+L +P+T + +P+SISF GLRPL Sbjct: 4 SASALLSPTTFSTAISHKNPNSISFHGLRPL 34
BLAST of CK702424 vs. ExPASy Swiss-Prot
Match: PSAG_PEA (Photosystem I reaction center subunit V (Fragment) OS=Pisum sativum GN=PSAG PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.115e-13 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 208 ELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 324 ELN LVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ Sbjct: 1 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39
BLAST of CK702424 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.338e-12 Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = 1 Query: 202 KAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVT 336 +AEL+ LVISLSTGLSLFLGRFVFFNFQREN+AKQ +PEQNG++ Sbjct: 68 RAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMS 111
BLAST of CK702424 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.410e-11 Identity = 41/76 (53.95%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 109 LIPRPKTPQHQGQNPPPQARHLRQRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVT 336 L P P+ PP R + R A L +VISLSTGLSL +GRFVFFNFQRENVAKQ +PEQNG T Sbjct: 19 LAPSPRAAASFRGVSPPARRSVAAR-------AALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKT 86 The following BLAST results are available for this feature:
BLAST of CK702424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK702424 ID=CK702424; Name=CK702424; organism=Citrus sinensis; type=EST; length=357bpback to top |