CK739586

Overview
NameCK739586
Unique NameCK739586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.372e-50
Identity = 53/64 (82.81%), Postives = 61/64 (95.31%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGE 194
            AAKAQ+VGWPP+RS+RKN+LATT KN+DEVDG+PG GALF+K SMDGAPYLRKVDLR+YTNYGE
Sbjct:  179 AAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGE 242          

HSP 2 Score: 100.138 bits (248), Expect = 2.372e-50
Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 1
Query:  190 GKLSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFID 393
            G+LSSALEKMF+ FT+GQCGS+ A G++MLSE+KLKDLL+G +YVLTYED+      +GDVPWEMFID
Sbjct:  241 GELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFID 308          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.036e-47
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLAT-TSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNY 188
            AAKAQVVGWPPIRS+RKN++A+ TSKN DEVDGKPG G LF+K SMDGAPYLRKVDLRTYT+Y
Sbjct:  161 AAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSY 223          

HSP 2 Score: 100.138 bits (248), Expect = 3.036e-47
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 1
Query:  193 KLSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFID 393
            +LSSALEKMFSCFT+GQCG H A GRE +SE KLKDLLHGSE+VLTYED+      +GDVPWE+F +
Sbjct:  225 QLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTE 291          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.777e-37
Identity = 46/66 (69.70%), Postives = 53/66 (80.30%), Query Frame = 1
Query:  193 KLSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFI 390
            +LSSALEKMFSCFTIGQ GSH   GR+ L+ES+L DLL GSEYV+TYED+      +GDVPWEMFI
Sbjct:  211 ELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFI 276          

HSP 2 Score: 79.7221 bits (195), Expect = 8.777e-37
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLATT-------SKNNDEVDGKPGP--GALFIKGSMDGAPYLRKVDLRTYTNYGE 194
            A+KAQVVGWPPIRSFRKNS+A++       +   +E + K GP    L++K SM+GAPYLRK+DL+TY +Y E
Sbjct:  139 ASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLE 211          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.635e-32
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLATTS-----KNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGE 194
            AAKAQVVGWPPIRS+RKN++A +      K++ E    P  G L++K SMDGAPYLRKVDL+ Y NY E
Sbjct:  104 AAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKE 172          

HSP 2 Score: 74.7146 bits (182), Expect = 2.635e-32
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  193 KLSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFID 393
            +LS ALEKMFSCFT+G   S+   GR+ LS+ +L DL +G+E VLTYED+      +GDVPW MF D
Sbjct:  172 ELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTD 238          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.799e-30
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 3
Query:    6 AKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGE 194
            AK QVVGWPP+RSFRKN LA      +E +    P A F+K SMDGAPYLRKVDL+ Y +Y E
Sbjct:   87 AKTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRE 149          

HSP 2 Score: 68.5514 bits (166), Expect = 8.799e-30
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  193 KLSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFID 393
            +LS +L KMFS FT G C S     ++ ++ESKL DLL+ S+YV TYED+      +GDVPWEMF++
Sbjct:  149 ELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVE 213          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.391e-27
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1
Query:  196 LSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFID 393
            LS+AL KMFS FTIG  G      ++ ++ESKL DLL+GS+YV TYED+      +GDVPWEMF+D
Sbjct:  145 LSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVD 208          

HSP 2 Score: 68.1662 bits (165), Expect = 8.391e-27
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 3
Query:    6 AKAQVVGWPPIRSFRKNSLA-------TTSKNNDEVDGKPGPGA--------LFIKGSMDGAPYLRKVDLRTYTNY 188
            AKAQVVGWPP+RSFRKN ++         ++ ND+  G  G  +         ++K SMDGAPYLRK+DL+ Y  Y
Sbjct:   67 AKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTY 142          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.173e-25
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 3
Query:    6 AKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGAL-FIKGSMDGAPYLRKVDLRTYTNY 188
            AKAQVVGWPP+R++RKN +A       E     G G + F+K SMDGAPYLRKVDL+ YT+Y
Sbjct:   73 AKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSY 134          

HSP 2 Score: 61.6178 bits (148), Expect = 1.173e-25
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  196 LSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFID 393
            LS AL KMFS FT+G  G+      + ++ESK+ DLL+ SEYV +YED+      +GDVPW MF++
Sbjct:  137 LSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVE 200          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.097e-24
Identity = 36/70 (51.43%), Postives = 44/70 (62.86%), Query Frame = 3
Query:    6 AKAQVVGWPPIRSFRKNSLAT--TSKNNDEVD-------GKPGPGALFIKGSMDGAPYLRKVDLRTYTNY 188
            AKAQVVGWPP+R++RKN +    TS   +E         G    GA  +K SMDGAPYLRKVDL+ Y +Y
Sbjct:   79 AKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSY 148          

HSP 2 Score: 63.1586 bits (152), Expect = 6.097e-24
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  196 LSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMFID 393
            LS AL KMFS FT+G  G+      + ++ESKL +LL+ SEYV +YED+      +GDVPWEMF++
Sbjct:  151 LSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVE 214          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.191e-22
Identity = 63/123 (51.22%), Postives = 79/123 (64.23%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLATTS--KNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGETIFCSGEDVQLLYNWSMWIT*STREGNAE*EQVEGSFAWIRICAYI*GQDGDWMLVG 365
            AAKAQVVGWPPIRS+RKN++AT     N ++VD K G G L++K SMDGAPYLRKVDL+TY NY        +D+ L     M+I  ST +  AE  Q +G +    +  Y   +DGDWMLVG
Sbjct:  119 AAKAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNY--------KDMSLGLE-KMFIGFSTGKEGAE-NQKDGEY----VLTYE-DKDGDWMLVG 226          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.340e-19
Identity = 55/123 (44.72%), Postives = 75/123 (60.98%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLATTS--KNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGETIFCSGEDVQLLYNWSMWIT*STREGNAE*EQVEGSFAWIRICAYI*GQDGDWMLVG 365
            AAKAQVVGWPPIRS+RKN++AT     + ++ + K G G L++K SMDGAPYLRKVDL+TY NY        +D+       M+I  +T +      + +G +    +  Y   +DGDWMLVG
Sbjct:  112 AAKAQVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNY--------KDLSTALE-KMFIGFTTGKDGLSESRKDGEY----VLTYE-DKDGDWMLVG 220          
The following BLAST results are available for this feature:
BLAST of CK739586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
IAA9_ARATH2.372e-5082.81Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA8_ARATH3.036e-4782.54Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA27_ARATH8.777e-3769.70Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA21_ORYSJ2.635e-3259.42Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]
AUX28_SOYBN8.799e-3060.32Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA16_ARATH8.391e-2756.06Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
IAA14_ARATH1.173e-2558.06Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA7_ARATH6.097e-2451.43Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA3_ORYSJ7.191e-2251.22Auxin-responsive protein IAA3 OS=Oryza sativa subs... [more]
IAA17_ORYSJ3.340e-1944.72Auxin-responsive protein IAA17 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5973 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739586 ID=CK739586; Name=CK739586; organism=Citrus sinensis; type=EST; length=393bp
CTGCTGCCAAGGCACAGGTCGTGGGTTGGCCTCCAATAAGATCATTTAGG
AAGAATTCATTGGCAACCACTTCAAAGAACAATGATGAAGTAGATGGAAA
ACCAGGTCCTGGTGCTCTTTTTATTAAGGGTAGCATGGACGGGGCTCCTT
ATTTGAGGAAGGTAGATTTGAGAACATACACCAATTATGGGGAAACTATC
TTCTGCTCTGGAGAAGATGTTCAGTTGCTTTACAATTGGTCAATGTGGAT
CACATGAAGCACCAGGGAGGGAAATGCTGAGTGAGAGCAAGTTGAAGGAT
CTTTTGCATGGATCAGAATATGTGCTTACATATGAGGACAGGATGGTGAC
TGGATGCTCGTTGGGGGATGTGCCGTGGGAGATGTTTATTGAT
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