CK739738

Overview
NameCK739738
Unique NameCK739738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length480
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.763e-30
Identity = 64/80 (80.00%), Postives = 66/80 (82.50%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  426 AKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.763e-30
Identity = 64/80 (80.00%), Postives = 66/80 (82.50%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  426 AKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.713e-30
Identity = 64/80 (80.00%), Postives = 65/80 (81.25%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSK+DTAEKGGQFSLHILKHSTIVAKPRSF
Sbjct:  426 SHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 6.156e-30
Identity = 64/80 (80.00%), Postives = 65/80 (81.25%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            +KVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  426 AKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 8.040e-30
Identity = 64/80 (80.00%), Postives = 64/80 (80.00%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIV KPRSF
Sbjct:  425 SHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVCKPRSF 504          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.339e-29
Identity = 63/80 (78.75%), Postives = 65/80 (81.25%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  427 SLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.339e-29
Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            S VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHST+VAKPRSF
Sbjct:  426 SHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTVVAKPRSF 505          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 3.055e-29
Identity = 62/78 (79.49%), Postives = 64/78 (82.05%), Query Frame = 2
Query:   53 VEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            VEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPR+F
Sbjct:  428 VEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRAF 505          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.055e-29
Identity = 62/80 (77.50%), Postives = 65/80 (81.25%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            SKVEANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPG+SKIDT+EKGGQFSLHILKHSTIV KPR+F
Sbjct:  426 SKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEKGGQFSLHILKHSTIVLKPRTF 505          
BLAST of CK739738 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.990e-29
Identity = 63/80 (78.75%), Postives = 64/80 (80.00%), Query Frame = 2
Query:   47 SKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 286
            S VEANGNDFRYLPFGVGRRSCP              RLVQN ELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  427 SHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
The following BLAST results are available for this feature:
BLAST of CK739738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TCMO_POPTM2.763e-3080.00Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI2.763e-3080.00Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_GLYEC4.713e-3080.00Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_HELTU6.156e-3080.00Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_CICAR8.040e-3080.00Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_SOYBN2.339e-2978.75Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU2.339e-2977.50Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PEA3.055e-2979.49Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_CATRO3.055e-2977.50Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_MEDSA3.990e-2978.75Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6127 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739738 ID=CK739738; Name=CK739738; organism=Citrus sinensis; type=EST; length=480bp
GAAGAAACCTGAAGAATTCAGGCCTGAGAGGTTTTTGGAGGAGGAGTCCA
AGGTTGAGGCTAATGGAAATGACTTCCGTTACCTTCCTTTCGGTGTTGGA
AGAAGAAGCTGCCCTGGAATTATCCTTGCTTTGCCAATTCTTGGTATCAC
TATTGGGCGTTTGGTACAGAACTTTGAGCTCTTGCCTCCTCCAGGTCAAT
CTAAGATTGACACTGCAGAGAAAGGTGGGCAGTTCAGTTTGCACATTTTG
AAGCACTCGACCATTGTTGCCAAGCCTAGATCATTCTAGTTTCACAATTC
CATTTGGTTGTAATGTTAAGACTGTTTCAAAGTGGTTGAATGGTTTCTTC
AATGTCGGATCAAATCAAGTGGCAGTTGGCTAGTTATGTAATACTTGTGT
AAATTTGTGAACTTAAATCTTCAAATCTTCATTTAAGATTTGCAATAAGT
TTTATGTTTAAAAAAAAAAAAAAAAAAAAA
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