CK739763

Overview
NameCK739763
Unique NameCK739763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length354
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739763 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.625e-12
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query:  205 DGSLETKKRRFTYAEITKITNDFETILGEGSFGKVYHGYLDDNTEVAVKM 354
            +G L+T KR F Y+E+  ITN+FE ++G+G FGKVYHG + +  +VAVK+
Sbjct:  554 NGPLKTAKRYFKYSEVVNITNNFERVIGKGGFGKVYHGVI-NGEQVAVKV 602          

HSP 2 Score: 33.113 bits (74), Expect = 3.625e-12
Identity = 24/67 (35.82%), Postives = 34/67 (50.75%), Query Frame = 2
Query:    2 PAGLVERSKNGSLSL----SVDLCSSYPC-XXXXXXXXXFVFPVIASFASLLVVTLAISAIYWRHKR 187
            P  L ERSKNGSLSL    + DLC S  C          ++ P++     ++VV L   A++ R K+
Sbjct:  479 PQRLHERSKNGSLSLRFGRNPDLCLSDSCSNTKKKNKNGYIIPLVV--VGIIVVLLTALALFRRFKK 543          
BLAST of CK739763 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.003e-12
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 1
Query:  211 SLETKKRRFTYAEITKITNDFETILGEGSFGKVYHGYLDDNTEVAVKM 354
            SLE KKRR TY+EI  +TN+FE ++GEG FG VYHGYL+D+ +VAVK+
Sbjct:  555 SLENKKRRITYSEILLMTNNFERVIGEGGFGVVYHGYLNDSEQVAVKV 602          
BLAST of CK739763 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 4.705e-12
Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query:  205 DGSLETKKRRFTYAEITKITNDFETILGEGSFGKVYHGYLDDNTEVAVKM 354
            + S  +KK RFTY+E+ ++TN+F+  LGEG FG VYHG+++   +VAVK+
Sbjct:  557 ESSFTSKKIRFTYSEVQEMTNNFDKALGEGGFGVVYHGFVNVIEQVAVKL 606          

HSP 2 Score: 32.7278 bits (73), Expect = 4.705e-12
Identity = 21/65 (32.31%), Postives = 33/65 (50.77%), Query Frame = 2
Query:    2 PAGLVERSKNG---SLSLSVDLCSSYPCXXXXXXXXXFVFPVIASFASLLVVTLAISAIYWRHKR 187
            P  L+++ K G    L  + DLC S  C         F+ PVIAS ASL++V + ++  +   K+
Sbjct:  470 PQALLDKEKEGLVLKLEGNPDLCKSSFCNTEKKNK--FLLPVIASAASLVIVVVVVALFFVFRKK 532          
BLAST of CK739763 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.707e-12
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 1
Query:  211 SLETKKRRFTYAEITKITNDFETILGEGSFGKVYHGYLDDNTEVAVKM 354
            S+ET K+R+TYAE+  +T  FE +LG+G FG VYHGY++   EVAVK+
Sbjct:  552 SIETIKKRYTYAEVLAMTKKFERVLGKGGFGMVYHGYINGTEEVAVKL 599          

HSP 2 Score: 27.335 bits (59), Expect = 4.707e-12
Identity = 21/66 (31.82%), Postives = 32/66 (48.48%), Query Frame = 2
Query:    2 PAGLVERSKNGSLSLSV----DLCSSYPCXXXXXXXXXFVFPVIASFASLLVVTLAISAIYWRHKR 187
            P  L+ + KNG L L++    +LC S  C          + PV+AS ASL  +   I+ ++   KR
Sbjct:  477 PQALLNKVKNG-LKLNIQGNPNLCFSSSCNKKKNS---IMLPVVASLASLAAIIAMIALLFVCIKR 538          
BLAST of CK739763 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.550e-11
Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  163 SYLLET*KTKKSLIDGSLETKKRRFTYAEITKITNDFETILGEGSFGKVYHGYLDDNTEVAVKM 354
            S+   T K+       S+ TK+R+FTY+E+ K+T +FE +LG+G FG VYHG LDD T+VAVKM
Sbjct:  536 SFTTGTVKSDARSSSSSIITKERKFTYSEVLKMTKNFERVLGKGGFGTVYHGNLDD-TQVAVKM 598          
The following BLAST results are available for this feature:
BLAST of CK739763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SIRK_ARATH3.625e-1252.00Senescence-induced receptor-like serine/threonine-... [more]
Y5169_ARATH4.003e-1264.58Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH4.705e-1250.00Probable leucine-rich repeat receptor-like protein... [more]
Y1756_ARATH4.707e-1256.25Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH7.550e-1151.56Probable LRR receptor-like protein kinase At1g5189... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6153 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739763 ID=CK739763; Name=CK739763; organism=Citrus sinensis; type=EST; length=354bp
GCCAGCAGGACTTGTTGAGAGATCAAAAAATGGTTCATTGTCCTTAAGTG
TGGACCTTTGCTCATCATATCCTTGCAAGGAGAATAATAAGAAGAAGAAC
AATTTTGTTTTCCCAGTAATAGCGTCATTTGCTTCATTATTGGTCGTCAC
ATTAGCTATATCAGCTATCTATTGGAGACATAAAAGACTAAGAAAAGCTT
AATAGATGGATCATTGGAGACAAAGAAGCGACGATTTACATATGCTGAAA
TTACAAAAATTACCAATGACTTTGAAACAATCCTCGGCGAGGGAAGTTTT
GGAAAAGTTTACCATGGCTACTTGGATGATAACACTGAAGTTGCTGTGAA
AATG
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