CK739777

Overview
NameCK739777
Unique NameCK739777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length303
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.077e-25
Identity = 52/86 (60.47%), Postives = 65/86 (75.58%), Query Frame = 1
Query:   37 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLNP 294
            A  KL   + LCM+V+ P+ AQAITCGQV+ +LAPCI Y+R GG +P  CCNG+R++N  ARTTPDRQ ACNCLKQ   S+P +NP
Sbjct:    5 AMTKLALVVALCMVVSVPI-AQAITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNP 89          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.652e-24
Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = 1
Query:   37 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLN 291
            A  KL   + LCM+V+ P+ AQA+TCGQV+ +LAPCI Y+R GG +P  CCNG+R++N  A+TT DRQTACNCLKQ   S+P +N
Sbjct:    5 AMTKLALVVALCMVVSVPI-AQALTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNINNLAKTTADRQTACNCLKQLSASVPGVN 88          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.652e-24
Identity = 53/86 (61.63%), Postives = 61/86 (70.93%), Query Frame = 1
Query:   37 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLNP 294
            A  KL   + LCM V+    A AITCGQVT SLAPCI Y+RSGG +P  CCNG+R++N  ARTT DRQTACNCLK   GSI  +NP
Sbjct:    5 AVTKLALVVALCMAVS---VAHAITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTINGLARTTADRQTACNCLKNLAGSISGVNP 87          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.114e-22
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1
Query:   37 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLNP 294
            A +KL   + LCM V+    A AITC QV+ +LAPCI Y+RSGG +P  CCNG++++N  A+TTPDRQ ACNCLK   GS+  +NP
Sbjct:    5 AVIKLALVVALCMAVS---VAHAITCSQVSANLAPCINYVRSGGAVPPACCNGIKTINGLAKTTPDRQAACNCLKNLAGSVSGVNP 87          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.609e-21
Identity = 46/85 (54.12%), Postives = 61/85 (71.76%), Query Frame = 1
Query:   37 AALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLN 291
            A +KL  A++LC++V  P +   ITCG V+  LAPCI YL+ GGP+   CC G+++LNAAA TTPDR+TACNCLK A  +I  +N
Sbjct:    5 AVIKLACAVLLCIVVAAPYAEAGITCGMVSSKLAPCIGYLK-GGPLGGGCCGGIKALNAAAATTPDRKTACNCLKSAANAIKGIN 88          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.584e-21
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 1
Query:   40 ALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLN 291
            A+ ++ A V CM+V  P + +A++CGQV+ SLAPCI YL  GG +P  CC+GV+SLN+AA+TTPDRQ AC CLK A  SI  +N
Sbjct:    5 AMMVLCAGVTCMVVGAPYT-EALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTPDRQAACGCLKSAYNSISGVN 87          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 3.584e-21
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 1
Query:  106 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLNP 294
            ITCGQV+ SLAPCI Y+R GG +P  CCNG+R++N  ARTTPDR+TACNCLKQ  GSI  +NP
Sbjct:    1 ITCGQVSSSLAPCIGYVRGGGAVPPACCNGIRNVNNLARTTPDRRTACNCLKQLSGSISGVNP 63          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.114e-21
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 1
Query:  106 ITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLNP 294
            ITCGQV+ +LAPCI Y+R GG +P  CCNG+R++N  ARTTPDRQ ACNCLKQ   S+P +NP
Sbjct:    1 ITCGQVSSALAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNP 63          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.985e-21
Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = 1
Query:   34 MAALKLVSALVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLN 291
            MA++K+V   ++  +V  P++  AITCG+V  +LAPC+ YL+ G      CC GVR+LN+AA TTPDRQ ACNCLK A GSI  LN
Sbjct:    1 MASMKVVCVALIMCIVIAPMAESAITCGRVDTALAPCLGYLQGGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLN 86          
BLAST of CK739777 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.985e-21
Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 1
Query:   61 LVLCMLVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAGGSIPNLN 291
            LV+CM+V  P++  AI+CG VT  L+PC+ YL +GGP P P CC GV+ L AAA TTPDRQ ACNCLK A GSI  LN
Sbjct:   12 LVMCMVVIAPMAEGAISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLN 88          
The following BLAST results are available for this feature:
BLAST of CK739777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
NLTP1_PRUDU1.077e-2560.47Non-specific lipid-transfer protein 1 OS=Prunus du... [more]
NLTP_PRUAV2.652e-2457.65Non-specific lipid-transfer protein OS=Prunus aviu... [more]
NLTP_MALDO2.652e-2461.63Non-specific lipid-transfer protein OS=Malus domes... [more]
NLTP_PYRCO1.114e-2254.65Non-specific lipid-transfer protein OS=Pyrus commu... [more]
NLTP_SPIOL1.609e-2154.12Non-specific lipid-transfer protein OS=Spinacia ol... [more]
NLTP_HELAN3.584e-2155.95Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP1_PRUAR3.584e-2168.25Non-specific lipid-transfer protein 1 OS=Prunus ar... [more]
NLTP1_PRUPE6.114e-2165.08Non-specific lipid-transfer protein 1 OS=Prunus pe... [more]
NLTP_CICAR7.985e-2153.49Non-specific lipid-transfer protein OS=Cicer ariet... [more]
NLTP6_LENCU7.985e-2161.54Non-specific lipid-transfer protein 6 OS=Lens culi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6167 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739777 ID=CK739777; Name=CK739777; organism=Citrus sinensis; type=EST; length=303bp
AAAAGAAAAAGAAAATCTCAGGAGAAATCTCAAATGGCTGCCCTCAAGCT
TGTTTCAGCTTTGGTTCTGTGCATGTTGGTGACTGGTCCCCTGAGTGCTC
AGGCCATAACATGTGGGCAGGTGACTGGCTCATTGGCACCATGCATCGTT
TACTTGAGATCGGGCGGCCCTATACCTGTGCCATGCTGCAACGGCGTCAG
GTCTCTCAACGCTGCCGCCAGAACCACACCTGACCGCCAAACTGCATGCA
ACTGCTTGAAGCAAGCCGGCGGATCAATCCCTAACCTCAACCCCTAATAA
TGC
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