CK739788

Overview
NameCK739788
Unique NameCK739788
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length271
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:479..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.731e-27
Identity = 59/79 (74.68%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 238
            EDVIHPLKVSLEDLYNGTSKKLSLSRNVI                    QGSGMKVSIRHLGPSMIQQMQHPCNECKGT
Sbjct:  117 EDVIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 195

HSP 2 Score: 26.5646 bits (57), Expect = 3.731e-27
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GETINDKDRC
Sbjct:  196 GETINDKDRC 205
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.296e-25
Identity = 54/79 (68.35%), Postives = 58/79 (73.42%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 238
            EDV+HPLKVSLEDL+ GT+KKLSLSRNVI                    QG+GMKVSIRHLGPSMIQQMQHPCNECKGT
Sbjct:  119 EDVVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGT 197

HSP 2 Score: 26.5646 bits (57), Expect = 3.296e-25
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GETINDKDRC
Sbjct:  198 GETINDKDRC 207
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.471e-24
Identity = 55/79 (69.62%), Postives = 57/79 (72.15%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 238
            EDV+HPLKVSLEDLYNGTSKKLSLSRNV+                    QGSGMKVSIR LGP MIQQMQHPCNECKGT
Sbjct:  119 EDVVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLGPGMIQQMQHPCNECKGT 197
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.533e-24
Identity = 54/79 (68.35%), Postives = 57/79 (72.15%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 238
            EDV+HPLKVSLE+LYNGTSKKLSLSRNVI                    QGSGMKVSIR LGP MIQQMQHPCN+CKGT
Sbjct:   98 EDVVHPLKVSLEELYNGTSKKLSLSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPCNDCKGT 176

HSP 2 Score: 24.2534 bits (51), Expect = 3.533e-24
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GE INDKDRC
Sbjct:  177 GEMINDKDRC 186
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.883e-22
Identity = 50/79 (63.29%), Postives = 53/79 (67.09%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 238
            EDV+HPLKVSLED+Y GT KKLSLSRN +                    QGSGMKVSIR LGP MIQQMQH CNECKGT
Sbjct:  119 EDVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHACNECKGT 197

HSP 2 Score: 25.409 bits (54), Expect = 8.883e-22
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GETIND+DRC
Sbjct:  198 GETINDRDRC 207
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.313e-19
Identity = 44/79 (55.70%), Postives = 52/79 (65.82%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 238
            EDV+HPLKVSLED+Y GT+KKLSLSR  +                    QGSGMK+SIR  GP M+QQ+QH CN+CKGT
Sbjct:  120 EDVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQFGPGMMQQVQHACNDCKGT 198

HSP 2 Score: 25.409 bits (54), Expect = 1.313e-19
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GETIND+DRC
Sbjct:  199 GETINDRDRC 208
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.510e-14
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKG 235
            ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G
Sbjct:  114 EDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNG 191

HSP 2 Score: 23.0978 bits (48), Expect = 6.510e-14
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GE IN+KDRC
Sbjct:  193 GEVINEKDRC 202
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.510e-14
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKG 235
            ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G
Sbjct:  114 EDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNG 191

HSP 2 Score: 23.0978 bits (48), Expect = 6.510e-14
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GE IN+KDRC
Sbjct:  193 GEVINEKDRC 202
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.510e-14
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKG 235
            ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G
Sbjct:  114 EDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNG 191

HSP 2 Score: 23.0978 bits (48), Expect = 6.510e-14
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GE IN+KDRC
Sbjct:  193 GEVINEKDRC 202
[Close]
BLAST of CK739788 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.510e-14
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 2 
Query:    2 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKG 235
            ED++HPLKVSLEDLYNG + KL LS+NV+                    +G G+++ IR L P M+QQMQ  C++C G
Sbjct:  114 EDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQSVCSDCNG 191

HSP 2 Score: 23.0978 bits (48), Expect = 6.510e-14
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3 
Query:  240 GETINDKDRC 269
            GE IN+KDRC
Sbjct:  193 GEVINEKDRC 202
The following BLAST results are available for this feature:
BLAST of CK739788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
DNJH_CUCSA3.731e-2774.68DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH_ATRNU3.296e-2568.35DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNJH2_ALLPO3.471e-2469.62DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO3.533e-2468.35DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH8.883e-2263.29Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNAJ2_ARATH1.313e-1955.70Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_RAT6.510e-1444.87DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE6.510e-1444.87DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN6.510e-1444.87DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN6.510e-1444.87DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739788 ID=CK739788; Name=CK739788; organism=Citrus sinensis; type=EST; length=271bp
AGAGGACGTAATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAATG
GGACATCTAAGAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGC
AAAGGGAAGGGGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCA
GGGATCTGGAATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTC
AACAAATGCAGCATCCTTGCAATGAGTGCAAGGGTACCTGGAGAAACAAT
CAATGACAAGGATCGCTGCCC
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