CK739812 | Citrus Genome Database

Overview


Name	CK739812
Unique Name	CK739812
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	661

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9569	contig	Csv1_Contig9569:759..1420.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

[Close]

BLAST of CK739812 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  214 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 441
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 141.354 bits (355), Expect = 4.104e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query:    1 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 213
            KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    6 KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 95.9005 bits (237), Expect = 9.602e-30
Identity = 48/50 (96.00%), Postives = 48/50 (96.00%), Query Frame = 1

Query:  442 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGNNL 591
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50

HSP 4 Score: 54.299 bits (129), Expect = 9.602e-30
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 3

Query:  582 KQLEDGRTLADYNIQKESTLHLVLRL 659
            KQLEDGRTLADYNIQKESTLHLVLRL
Sbjct:   48 KQLEDGRTLADYNIQKESTLHLVLRL 73

The following BLAST results are available for this feature:

BLAST of CK739812 vs. ExPASy Swiss-Prot

BLAST of CK739812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_WHEAT	6.765e-36	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_SOYBN	6.765e-36	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	6.765e-36	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	6.765e-36	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	6.765e-36	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	6.765e-36	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	6.765e-36	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	6.765e-36	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]
UBIQ_MAIZE	6.765e-36	100.00	Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1	[more]
UBIQ_LUPPO	6.765e-36	100.00	Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_6202 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE59H10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK739812 ID=CK739812; Name=CK739812; organism=Citrus sinensis; type=EST; length=661bp
AAAACCCTGACCGGTAAGACTATAACTTTGGAGGTTGAAAGCTCTGACAC
GATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTG
ATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTACT
CTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTCG
TCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCACCGGAAAAACAA
TTACTCTTGAGGTTGAAAGTTCTGACACCATTGACAACGTGAAAGCAAAA
ATTCAAGACAAGGAGGGTATCCCACCAGATCAGCAGAGGCTCATTTTTGC
TGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAACATCCAGA
AAGAATCCACTCTTCACTTGGTTCTTCGCCTCCGTGGTGGTATGCAGATT
TTTGTGAAGACACTCACTGGGAAAACCATCACGTTGGAGGTTGAGAGTTC
GGACACAATTGACAATGTGAAGGCTAAGATCCAGGATAAGGAGGGGATTC
CCCCAGACCAGCAGAGGTTGATCTTTGCTGGAAACAACTTGAGGATGGAA
GGACTCTTGCTGATTACAACATCCAGAAGGAGTCCACTCTGCATCTTGTG
CTCCGACTCCG