CK739824

Overview
NameCK739824
Unique NameCK739824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length297
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739824 vs. ExPASy Swiss-Prot
Match: PPA8_ARATH (Purple acid phosphatase 8 OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.737e-23
Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 3
Query:   93 CPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGL 293
            C S+AELP F  P +PDGSLSFLVVGDWGRRG+YNQ++VA QMG +G+ L IDF+ISTGDNFYDDG+
Sbjct:   26 CNSTAELPRFVQPPEPDGSLSFLVVGDWGRRGSYNQSQVALQMGKIGKDLNIDFLISTGDNFYDDGI 92          
BLAST of CK739824 vs. ExPASy Swiss-Prot
Match: PPA3_ARATH (Purple acid phosphatase 3 OS=Arabidopsis thaliana GN=PAP3 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.623e-21
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 3
Query:   99 SSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLT 296
            S+AEL     P+K DG++SFLV+GDWGRRG+YNQ++VA QMG +GEKL IDF+ISTGDNFYD+GLT
Sbjct:   57 STAELRRLLQPSKTDGTVSFLVIGDWGRRGSYNQSQVALQMGEIGEKLDIDFVISTGDNFYDNGLT 122          
BLAST of CK739824 vs. ExPASy Swiss-Prot
Match: PPA7_ARATH (Purple acid phosphatase 7 OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.179e-21
Identity = 47/79 (59.49%), Postives = 60/79 (75.95%), Query Frame = 3
Query:   63 IALLGSLYVFCPSSAELPWFEHPAKP--DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGL 293
            I +  S++    + ++L   +HP K   DGSLSFLV+GDWGR+G +NQ+ VAHQMG+VGEKL IDF+IS GDNFYDDGL
Sbjct:   10 ILMFLSIFFINGALSKLERLKHPVKKKSDGSLSFLVIGDWGRKGGFNQSLVAHQMGVVGEKLDIDFVISVGDNFYDDGL 88          
BLAST of CK739824 vs. ExPASy Swiss-Prot
Match: PPA17_ARATH (Purple acid phosphatase 17 OS=Arabidopsis thaliana GN=PAP17 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.377e-20
Identity = 42/65 (64.62%), Postives = 56/65 (86.15%), Query Frame = 3
Query:   99 SSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGL 293
            S+ EL  F  PAK DGS+SF+V+GDWGRRG++NQ+ VA+QMG +GEK+ +DF++STGDNFYD+GL
Sbjct:   29 SNGELQRFIEPAKSDGSVSFIVIGDWGRRGSFNQSLVAYQMGKIGEKIDLDFVVSTGDNFYDNGL 93          
BLAST of CK739824 vs. ExPASy Swiss-Prot
Match: PPA4_ARATH (Purple acid phosphatase 4 OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.749e-18
Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 3
Query:  105 AELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGL 293
            AEL   +H   PDGS+SFLV+GDWGR G YNQ++VA QMG +GE++ I+F++STGDN YD+G+
Sbjct:   31 AELATVQHAPNPDGSISFLVIGDWGRHGLYNQSQVALQMGRIGEEMDINFVVSTGDNIYDNGM 93          
The following BLAST results are available for this feature:
BLAST of CK739824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PPA8_ARATH1.737e-2373.13Purple acid phosphatase 8 OS=Arabidopsis thaliana ... [more]
PPA3_ARATH3.623e-2169.70Purple acid phosphatase 3 OS=Arabidopsis thaliana ... [more]
PPA7_ARATH6.179e-2159.49Purple acid phosphatase 7 OS=Arabidopsis thaliana ... [more]
PPA17_ARATH1.377e-2064.62Purple acid phosphatase 17 OS=Arabidopsis thaliana... [more]
PPA4_ARATH3.749e-1860.32Purple acid phosphatase 4 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6214 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE60C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739824 ID=CK739824; Name=CK739824; organism=Citrus sinensis; type=EST; length=297bp
ATGATGATGATCACGATTGCTGCTATTGATCATCATCATGATTAATGGAG
AAATAAGGGTTCATTGCTCTTCTAGGCAGCTTGTACGTTTTTTGCCCCTC
ATCGGCTGAGCTTCCATGGTTCGAACACCCGGCCAAACCCGATGGGTCTC
TGAGCTTTCTGGTCGTCGGAGATTGGGGAAGAAGAGGGGCCTACAACCAA
ACTAAAGTTGCCCACCAGATGGGAATAGTGGGAGAGAAGCTGAAGATTGA
TTTCATAATATCAACCGGAGATAATTTTTATGATGATGGACTGACCG
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