CK739857

Overview
NameCK739857
Unique NameCK739857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length407
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3300 contig Csv1_Contig3300:320..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.496e-20
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLK  AGSI  +NPNNA GLP  CGV++PYKIS ST+C+ V+
Sbjct:   74 CLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNCATVK 115

HSP 2 Score: 45.8246 bits (107), Expect = 9.496e-20
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVPCCNGVR 80
            T SLAPCI Y+RSGG +P  CCNG+R
Sbjct:   31 TSSLAPCIGYVRSGGAVPPACCNGIR 56

HSP 3 Score: 26.9498 bits (58), Expect = 9.496e-20
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1 
Query:  100 RTTPDRQTACNLLE 141
            RTT DRQTACN L+
Sbjct:   63 RTTADRQTACNCLK 76
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.396e-17
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLKQ +GSIP +NPNNA  LP  CGV++PYKIS ST+C+ V+
Sbjct:   50 CLKQLSGSIPGVNPNNAAALPGKCGVNVPYKISASTNCATVK 91

HSP 2 Score: 40.4318 bits (93), Expect = 1.396e-17
Identity = 14/26 (53.85%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVPCCNGVR 80
            + +LAPCI Y++ GG +P  CCNG+R
Sbjct:    7 SSNLAPCINYVKGGGAVPPACCNGIR 32

HSP 3 Score: 23.483 bits (49), Expect = 1.396e-17
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 
Query:  100 RTTPDRQTACNLLE 141
            RTT DR+ ACN L+
Sbjct:   39 RTTADRRAACNCLK 52
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP_PRUAV (Non-specific lipid-transfer protein OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 4.754e-17
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLKQ + S+P +N NNA  LP  CGV++PYKIS ST+C+ V+
Sbjct:   76 CLKQLSASVPGVNANNAAALPGKCGVNVPYKISPSTNCATVK 117

HSP 2 Score: 42.743 bits (99), Expect = 4.754e-17
Identity = 15/26 (57.69%), Postives = 20/26 (76.92%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVPCCNGVR 80
            + +LAPCI Y+R GG +P  CCNG+R
Sbjct:   33 SSNLAPCIAYVRGGGAVPPACCNGIR 58

HSP 3 Score: 25.7942 bits (55), Expect = 4.754e-17
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1 
Query:  100 RTTPDRQTACNLLE 141
            +TT DRQTACN L+
Sbjct:   65 KTTADRQTACNCLK 78
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 8.559e-17
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLK A  SI  LN N A GLP  CGVS+PYKIS STDC  V+
Sbjct:   50 CLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK 91

HSP 2 Score: 44.669 bits (104), Expect = 8.559e-17
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVPCCNGVR 80
            + SLAPCI YLR+GG +P  CCNGVR
Sbjct:    7 SSSLAPCINYLRAGGVVPANCCNGVR 32

HSP 3 Score: 24.6386 bits (52), Expect = 8.559e-17
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  100 RTTPDRQTACNLLEAS 147
            +TT DRQ ACN L+++
Sbjct:   39 KTTADRQAACNCLKSA 54
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.374e-15
Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLK A  SI  +N  NA   P  CGVSIPYKIS STDCSKV+
Sbjct:   75 CLKSAYNSISGVNAGNAASFPGKCGVSIPYKISPSTDCSKVQ 116

HSP 2 Score: 39.2762 bits (90), Expect = 1.374e-15
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVPCCNGVR 80
            + SLAPCI YL  GG +P  CC+GV+
Sbjct:   32 SSSLAPCISYLTKGGAVPPACCSGVK 57

HSP 3 Score: 25.409 bits (54), Expect = 1.374e-15
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:  100 RTTPDRQTACNLLEAS 147
            +TTPDRQ AC  L+++
Sbjct:   64 KTTPDRQAACGCLKSA 79
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.322e-15
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLK AAGSI  LN NNA  LP  CGV+IPYKIS ST+C+ V+
Sbjct:   68 CLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109

HSP 2 Score: 32.7278 bits (73), Expect = 2.322e-15
Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVP-CCNGVR 80
            T  L+PC+ YL +GGP P P CC GV+
Sbjct:   25 TSDLSPCLTYL-TGGPGPSPQCCGGVK 50

HSP 3 Score: 26.9498 bits (58), Expect = 2.322e-15
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 
Query:  103 TTPDRQTACNLLEAS 147
            TTPDRQ ACN L+++
Sbjct:   58 TTPDRQAACNCLKSA 72
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.971e-15
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLK AAGSI  LN NNA  LP  CGV IPYKIS ST+C+ V+
Sbjct:   76 CLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117

HSP 2 Score: 32.7278 bits (73), Expect = 2.971e-15
Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVP-CCNGVR 80
            T  L+PC+ YL +GGP P P CC GV+
Sbjct:   33 TSDLSPCLTYL-TGGPGPSPQCCGGVK 58

HSP 3 Score: 26.9498 bits (58), Expect = 2.971e-15
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 
Query:  103 TTPDRQTACNLLEAS 147
            TTPDRQ ACN L+++
Sbjct:   66 TTPDRQAACNCLKSA 80
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.978e-15
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CLK AAGSI  LN NNA  LP  CGV+IPYKIS +T+C+ V+
Sbjct:   76 CLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117

HSP 2 Score: 32.7278 bits (73), Expect = 4.978e-15
Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVP-CCNGVR 80
            T  L+PC+ YL +GGP P P CC GV+
Sbjct:   33 TSDLSPCLTYL-TGGPGPSPQCCGGVK 58

HSP 3 Score: 26.9498 bits (58), Expect = 4.978e-15
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1 
Query:  103 TTPDRQTACNLLEAS 147
            TTPDRQ ACN L+++
Sbjct:   66 TTPDRQAACNCLKSA 80
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.444e-15
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            CL  AA S P LN   A GLP+ACGV+IPYKIS ST+C+ VR
Sbjct:   76 CLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117

HSP 2 Score: 36.1946 bits (82), Expect = 6.444e-15
Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVPCCNGV 77
            +G +APCI YL   GP+P  CC GV
Sbjct:   33 SGYVAPCIGYLTQNGPLPRGCCTGV 57

HSP 3 Score: 25.0238 bits (53), Expect = 6.444e-15
Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 1 
Query:  100 RTTPDRQTACNLL 138
            RTTPDRQ AC  L
Sbjct:   65 RTTPDRQQACRCL 77
[Close]
BLAST of CK739857 vs. ExPASy Swiss-Prot
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.467e-15
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 2 
Query:  134 CLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 259
            C+K AA SI  LN NNA  LP  CGV+IPYKIS ST+C+ V+
Sbjct:   75 CMKSAASSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 116

HSP 2 Score: 35.039 bits (79), Expect = 6.467e-15
Identity = 16/27 (59.26%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:    3 TGSLAPCIVYLRSGGPIPVP-CCNGVR 80
            TG L+PC+ YL +GGP P P CC GV+
Sbjct:   32 TGDLSPCLTYL-TGGPGPSPQCCGGVK 57

HSP 3 Score: 26.1794 bits (56), Expect = 6.467e-15
Identity = 9/15 (60.00%), Postives = 13/15 (86.67%), Query Frame = 1 
Query:  103 TTPDRQTACNLLEAS 147
            TTPDRQ ACN ++++
Sbjct:   65 TTPDRQAACNCMKSA 79
The following BLAST results are available for this feature:
BLAST of CK739857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NLTP_MALDO9.496e-2064.29Non-specific lipid-transfer protein OS=Malus domes... [more]
NLTP1_PRUDO1.396e-1764.29Non-specific lipid-transfer protein 1 OS=Prunus do... [more]
NLTP_PRUAV4.754e-1757.14Non-specific lipid-transfer protein OS=Prunus aviu... [more]
LTP1_MORNI8.559e-1764.29Non-specific lipid-transfer protein 1 OS=Morus nig... [more]
NLTP_HELAN1.374e-1564.29Non-specific lipid-transfer protein OS=Helianthus ... [more]
NLTP4_LENCU2.322e-1566.67Non-specific lipid-transfer protein 4 (Fragment) O... [more]
NLTP6_LENCU2.971e-1566.67Non-specific lipid-transfer protein 6 OS=Lens culi... [more]
NLTP2_LENCU4.978e-1564.29Non-specific lipid-transfer protein 2 OS=Lens culi... [more]
NLTP2_BRANA6.444e-1564.29Non-specific lipid-transfer protein 2 OS=Brassica ... [more]
NLTP5_LENCU6.467e-1561.90Non-specific lipid-transfer protein 5 OS=Lens culi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6248 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739857 ID=CK739857; Name=CK739857; organism=Citrus sinensis; type=EST; length=407bp
TGACTGGCTCATTGGCACCATGCATCGTTTACTTGAGATCGGGCGGCCCT
ATACCTGTGCCATGCTGCAACGGCGTCAGGGTCTCTCAACGCTGCCGCCA
GAACCACACCTGACCGCCAAACTGCATGCAACTTGCTTGAAGCAAGCCGC
CGGATCAATCCCTAACCTCAACCCTAATAATGCTGTTGGTCTTCCACGAG
CTTGTGGAGTCAGCATTCCTTACAAGATCAGCATCTCCACTGACTGCTCT
AAGGTCCGGTGAACAGGAATCTGGGCTGTTGATTTTCATATTTAAGTTGA
CGGAGTAGAATAAATGTATAATAATAAGGACATTTTTGTGTCCGAATTAT
GAGTCTCTCTCTACACTTTGTACTGCGAGTCTCGTTCCCGCCCTCGTTTC
ATGTTGT
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