CK739877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS202_ARATH (40S ribosomal protein S20-2 OS=Arabidopsis thaliana GN=RPS20B PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.086e-25 Identity = 58/66 (87.88%), Postives = 58/66 (87.88%), Query Frame = 3 Query: 78 MAYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 MAY MKPTK GLE EQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTK L I Sbjct: 1 MAYEPMKPTKAGLEAPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKI 66
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS201_ARATH (40S ribosomal protein S20-1 OS=Arabidopsis thaliana GN=RPS20A PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 2.028e-24 Identity = 57/65 (87.69%), Postives = 57/65 (87.69%), Query Frame = 3 Query: 81 AYAAMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 AY MKP K GLEE EQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTK L I Sbjct: 4 AYQPMKPGKAGLEEPLEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKI 68
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_ORYSJ (40S ribosomal protein S20 OS=Oryza sativa subsp. japonica GN=RPS20 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19 Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 3 Query: 78 MAYAA-MKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 +AYA MK K G E +QE H+IRITLSSK+VKNLEKVC DLV+GAKDK L+VKGPVRMPTK LHI Sbjct: 6 VAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMPTKVLHI 72
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_RAT (40S ribosomal protein S20 OS=Rattus norvegicus GN=Rps20 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 90 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L I Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_PONAB (40S ribosomal protein S20 OS=Pongo abelii GN=RPS20 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 90 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L I Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_PIG (40S ribosomal protein S20 OS=Sus scrofa GN=RPS20 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 90 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L I Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_MOUSE (40S ribosomal protein S20 OS=Mus musculus GN=Rps20 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 90 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L I Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_MACFA (40S ribosomal protein S20 OS=Macaca fascicularis GN=RPS20 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 90 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L I Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_HUMAN (40S ribosomal protein S20 OS=Homo sapiens GN=RPS20 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 90 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L I Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
BLAST of CK739877 vs. ExPASy Swiss-Prot
Match: RS20_BOVIN (40S ribosomal protein S20 OS=Bos taurus GN=RPS20 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15 Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 3 Query: 90 AMKPTKPGLEEAQEQIHKIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKGLHI 275 A K T E + IH+IRITL+S+NVK+LEKVC DL+RGAK+K L+VKGPVRMPTK L I Sbjct: 2 AFKDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63 The following BLAST results are available for this feature:
BLAST of CK739877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739877 ID=CK739877; Name=CK739877; organism=Citrus sinensis; type=EST; length=275bpback to top |