CK739930

Overview
NameCK739930
Unique NameCK739930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK739930 vs. ExPASy Swiss-Prot
Match: CP12_CHLRE (Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.741e-16
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:  121 ISEKVEQSIKSAEEACEGDPASGECAAAWDEVEELSAAASHARERKKD----SDPLEAYCKDNPETDECRTYED 330
            +++KV+ ++K AE+AC     S +CA AWD VEELSAA SH ++  K     +DPLEA+CKD P+ DECR YED
Sbjct:    8 LNKKVQDAVKEAEDAC-AKGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 80
The following BLAST results are available for this feature:
BLAST of CK739930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CP12_CHLRE7.741e-1652.70Calvin cycle protein CP12 OS=Chlamydomonas reinhar... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6752 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739930 ID=CK739930; Name=CK739930; organism=Citrus sinensis; type=EST; length=412bp
CCGAAGTCAAAGGTTCAACCCAGCAGGTCTCTGTGGCTCAACAACCCATC
AAGGAAAAGGCCCGCTCAGTTTAGAACAGGGCGCATGCACATGCAACCCC
TGAGAGCTGCTCCCGATAGAATCTCAGAGAAGGTGGAGCAAAGCATCAAG
AGTGCAGAGGAGGCGTGCGAGGGGGACCCTGCTAGTGGCGAGTGTGCTGC
TGCATGGGACGAGGTGGAGGAGCTGAGTGCCGCGGCCAGCCATGCTAGAG
AGAGGAAGAAGGATTCCGATCCTTTGGAGGCTTACTGTAAGGACAACCCA
GAGACCGATGAGTGCCGCACTTATGAAGATTGATAACATCGTCGTTATGC
TCTTTTAATTATGTTTTTTTTTTCTCCTTTTTAAGTCCTTGGATGTTGTT
ATGTGATGGGAT
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