CK739957

Overview
NameCK739957
Unique NameCK739957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.392e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
Sbjct:  413 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 480          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 6.958e-33
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPP PRGVPQI
Sbjct:  413 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPGPRGVPQI 480          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 2.025e-32
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct:  409 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 476          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 4.510e-32
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAPRGVPQI
Sbjct:  413 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQI 480          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 5.891e-32
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct:  413 GGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 480          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.312e-31
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GG MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct:  413 GGGMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 480          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.714e-31
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMTVLI RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct:  413 GGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 480          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.238e-31
Identity = 62/68 (91.18%), Postives = 67/68 (98.53%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMTVLIPRNTTIPTKKEQ+FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQ+
Sbjct:  412 GGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQV 479          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 4.987e-31
Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMTVLIPRNTTIPTKKEQVFSTYSD +PGVLIQV+EGERTRTRDNNLLGKFELSGIPPAPR VPQI
Sbjct:   21 GGVMTVLIPRNTTIPTKKEQVFSTYSDKEPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRDVPQI 88          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.111e-30
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNTTIPTKK ++FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI 472          
The following BLAST results are available for this feature:
BLAST of CK739957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SOLLC2.392e-33100.00Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7E_SPIOL6.958e-3398.53Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE2.025e-3297.06Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_CHLRE4.510e-3295.59Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP71_ARATH5.891e-3295.59Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7C_PETHY1.312e-3195.59Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH1.714e-3195.59Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_SOYBN2.238e-3191.18Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_LUPPO4.987e-3194.12Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]
HSP72_PICAN1.111e-3091.18Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6779 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739957 ID=CK739957; Name=CK739957; organism=Citrus sinensis; type=EST; length=205bp
GGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCACTATTCCAACCAA
GAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTGTTGA
TCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTTGCTT
GGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTCCACA
AATCA
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