CK739991

Overview
NameCK739991
Unique NameCK739991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK739991 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 2.685e-61
Identity = 110/150 (73.33%), Postives = 133/150 (88.67%), Query Frame = 3 
Query:    3 EPVLQAFKLMRRKKIGGIPVVEKGGNKAVGNISLRDIQFLLTAPEIYHDYRSITAKNFLTAVRKYMEEHHHEDSPLLSGMVTCSRNHTIKELIHLLDSKKIHRIYVVDFNGNLEGVITLRDIISRLVHEPPGYFGDFFDGVLPLPENSRV 452
            EPVLQAFKLMRRK+IGGIPV+E+   K VGNISLRD+QFLLTAPEIYHDYRSIT KNFL +VR+++E+     +P++SG++ C++NHT+KELI +LD++KIHRIYVVD  GNLEG+ITLRDII+RLVHEP GYFGDFFDGV+PLPEN RV
Sbjct:  275 EPVLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSVREHLEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITLRDIIARLVHEPSGYFGDFFDGVMPLPENYRV 424
The following BLAST results are available for this feature:
BLAST of CK739991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KING1_ARATH2.685e-6173.33SNF1-related protein kinase regulatory subunit gam... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6485 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739991 ID=CK739991; Name=CK739991; organism=Citrus sinensis; type=EST; length=577bp
ATGAACCAGTGCTTCAGGCATTTAAGTTGATGAGGAGAAAGAAAATTGGA
GGCATACCTGTTGTTGAAAAAGGCGGTAATAAGGCCGTGGGTAATATAAG
CCTGAGAGATATTCAGTTCCTTTTAACTGCACCAGAGATCTATCACGATT
ATAGATCTATCACTGCTAAGAACTTCCTGACAGCAGTTAGAAAGTACATG
GAAGAACATCATCATGAGGACTCACCATTGTTAAGTGGCATGGTAACATG
CAGCAGAAACCACACAATAAAGGAATTAATCCATCTGCTTGATTCCAAAA
AAATTCATCGAATTTATGTGGTGGATTTTAATGGGAATTTGGAAGGTGTG
ATCACATTGAGAGACATCATCTCAAGGCTAGTACACGAGCCTCCAGGCTA
CTTTGGTGATTTCTTCGATGGAGTCTTGCCATTGCCTGAGAATAGCAGGG
TCTAAAGGTAACAAGCCCCTCATGTTTTCAGCAACTGATCATTTGCTTCT
GTCTGATGTTGGTGTGTCCGAGACTGGTTGGATGCAGTGATTGTAACGTA
ATTTATTTCATGCTGATGTAATAGAAA
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