CK740089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 3.158e-42 Identity = 74/107 (69.16%), Postives = 95/107 (88.79%), Query Frame = 3 Query: 3 LIVWMRTAALPTFRRLYGRIESDIQANDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYVVMPRPLGDPAFLSWNRHPAG 323 LIVWMRTAALPTFR+LYG+IESD++ D++ V + NNYNTYSF G+KKLVLSTT+W+GGKNDFLGIAY+T GG+C +LA++F ++Y+V PR LGDP++LSWNR+P G Sbjct: 242 LIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNRNPGG 348
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.125e-42 Identity = 74/109 (67.89%), Postives = 96/109 (88.07%), Query Frame = 3 Query: 3 LIVWMRTAALPTFRRLYGRIESDIQANDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYVVMPRPLGDPAFLSWNRHPAGHQ 329 LIVWMRTAALPTFR+LYG+IE+D+ A D++TV+++NNYNTYSF G+KKLVLSTT+W+GG+NDFLGIAY+T G +CL LA++F ++Y+V PR LGDP++LSWNR G Q Sbjct: 242 LIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGGLQ 350
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 9.189e-42 Identity = 74/107 (69.16%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 3 LIVWMRTAALPTFRRLYGRIESDIQANDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYVVMPRPLGDPAFLSWNRHPAG 323 LIVWMRTAALPTFR+LYG+IESD++ +++ V ++NNYNTYSF G+KKLVLSTT+W+GGKNDFLGIAY+T GG+C VLA++F ++Y+V PR LGDP +LSWNR P G Sbjct: 243 LIVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNRIPGG 349
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 4.560e-41 Identity = 72/107 (67.29%), Postives = 94/107 (87.85%), Query Frame = 3 Query: 3 LIVWMRTAALPTFRRLYGRIESDIQANDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYVVMPRPLGDPAFLSWNRHPAG 323 LIVWMRTAALPTFR+LYG+I++D+QA D++ V+++NNYNTYSF G+KKLVLSTT+W+GG+NDFLGIAY+T G +CL LA+SF ++Y+ PR LGDP++LSWNR G Sbjct: 245 LIVWMRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLAKPRQLGDPSYLSWNRSAGG 351
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.288e-27 Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 6 IVWMRTAALPTFRRLYGRIESDIQANDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYVVMPRPLGDPAFLSWNR 311 IVWMR AAL +FR+LYGRIE D++ V V + NNYNTYSF G+KKL+LST+ W+GG+NDFLGI Y+ G +V++I F+L+++ PRP GD SWN+ Sbjct: 240 IVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: CC50A_CHICK (Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.425e-18 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 6 IVWMRTAALPTFRRLYGRIE--SDIQAN---DSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVY 260 IVWMRTAALPTFR+LY IE S++Q ++ I NY +SF G K+++LST +W+GGKN FLGIAYIT G +C L + ++++ Sbjct: 269 IVWMRTAALPTFRKLYRLIERKSNLQPTLQAGKYSLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITVGSICFFLGVVLLIIH 358
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: CC50B_MOUSE (Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.253e-18 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 3 Query: 6 IVWMRTAALPTFRRLYGRIESDIQA----NDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYV 263 +VWMRTAALPTFR+LY RI + + V I NY +FGG K ++LS +W+GGKN FLGIAY+ G LC+V+ ++VY+ Sbjct: 251 VVWMRTAALPTFRKLYARIRQGNYSAGLPRGTYRVNITYNYPVRAFGGHKLIILSNISWMGGKNPFLGIAYLVVGSLCIVMGFVMLVVYI 340
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: CC50B_HUMAN (Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.998e-17 Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 6 IVWMRTAALPTFRRLYGRIESDIQA----NDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYV 263 +VWMRTAALPTFR+LY RI + + V I NY +FGG K L+ S+ +W+GGKN FLGIAY+ G LC++ ++VY+ Sbjct: 251 VVWMRTAALPTFRKLYARIRQGNYSAGLPRGAYRVNITYNYPVRAFGGHKLLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLVVYI 340
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: CC50A_MOUSE (Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.077e-16 Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 6 IVWMRTAALPTFRRLYGRIESDIQANDSVT-----VIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILV 257 IVWMRTAALPTFR+LY IE + ++ + I NY +SF G K+++LST +W+GGKN FLGIAYIT G + +L + +++ Sbjct: 261 IVWMRTAALPTFRKLYRLIERRDDLHPTLPAGQYFLNITYNYPVHSFDGRKRMILSTISWMGGKNPFLGIAYITIGSISFLLGVVLLVI 349
BLAST of CK740089 vs. ExPASy Swiss-Prot
Match: MUG89_SCHPO (Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe GN=mug89 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.660e-16 Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 3 Query: 3 LIVWMRTAALPTFRRLYGRIESDIQANDSVTVIIENNYNTYSFGGEKKLVLSTTTWIGGKNDFLGIAYITGGGLCLVLAISFILVYVVMPRPLGDPAFLSWN 308 L VWMRTA LPTF +L R ++D + + I + SF G K LVL+T + +GGKN FLGIAYI +C+VL F L + + PR L D +L+W+ Sbjct: 281 LQVWMRTAGLPTFSKLAMRNDNDDIFPGTYEIKIGLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVVLGTVFTLRHFIRPRKLADHRYLNWD 382 The following BLAST results are available for this feature:
BLAST of CK740089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740089 ID=CK740089; Name=CK740089; organism=Citrus sinensis; type=EST; length=539bpback to top |