CK932658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_ARATH (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2) HSP 1 Score: 293.508 bits (750), Expect = 8.982e-79 Identity = 142/188 (75.53%), Postives = 160/188 (85.11%), Query Frame = 3 Query: 234 QVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797 +V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK LR+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TP G+PPG +NVVMGNAP+I Sbjct: 71 KVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELALQAGVPPGALNVVMGNAPEI 258
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_ORYSJ (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 7.117e-76 Identity = 137/188 (72.87%), Postives = 154/188 (81.91%), Query Frame = 3 Query: 234 QVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797 +V NPATGE +ANVSCMG KET DAI+SA F SWSKLTA ERSK LRKW+DL+++HKEEL L+TLEQGKP+KEA+ EV YGA FIE++AEEAKR+YG+IIP TL DRRL VLKQPVGV GA+TPWNFPLAMITRKVGPALACGCTVVVKPSEFTP GIP G +NVVMGNAP+I Sbjct: 72 EVQNPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANERSKALRKWHDLIISHKEELALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQPVGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAADLALQAGIPAGAINVVMGNAPEI 259
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_RAT (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 5.487e-52 Identity = 103/187 (55.08%), Postives = 134/187 (71.66%), Query Frame = 3 Query: 216 TPAFSRQVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV 776 TPA + V++PA+G + V+ G E + A+ +A+DAF+SW +++ ERS LRKWYDL++ +K+EL ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II + D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP GIPPGV NV+ Sbjct: 60 TPA-TFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEISVKERSSLLRKWYDLMIQNKDELAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVYGDIIYTSAKDKRGLVLKQPVGVASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALAQLANQAGIPPGVYNVI 245
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: GABD_ECOLI (Succinate-semialdehyde dehydrogenase [NADP+] OS=Escherichia coli (strain K12) GN=gabD PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.487e-52 Identity = 99/184 (53.80%), Postives = 127/184 (69.02%), Query Frame = 3 Query: 237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNA 788 V NPA G+ + +V MG ET+ AI +A A +W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AEE KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP+ TP G+P GV NVV G+A Sbjct: 30 VTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSA 213
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_MOUSE (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.765e-50 Identity = 98/180 (54.44%), Postives = 128/180 (71.11%), Query Frame = 3 Query: 237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV 776 V++PA+G + V+ G E + A+ +A+DAFNSW ++ ERS LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R+YG+II + D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP GIP GV NV+ Sbjct: 66 VYDPASGAKLGTVADCGVPEARAAVRAAYDAFNSWKGVSVKERSLLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSALFLEWFSEEARRIYGDIIYTSAKDKRGLVLKQPVGVAAIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALAQLANQAGIPAGVYNVI 245
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: GABD_BACSU (Succinate-semialdehyde dehydrogenase [NADP+] OS=Bacillus subtilis GN=gabD PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.708e-50 Identity = 97/187 (51.87%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797 V+NPATGE I + E ++AI + AF +WSK +A ER+ L+KWY+L++ HKEEL LIT E GKP +EAVGEV YGA +IE++AEEAKRVYG +PA +R+ V +QPVG AITPWNFP AMITRK PALA GCT ++KP+ TP GIP V+ VV+G+ +I Sbjct: 7 VYNPATGEEIKTIPQQSATEVEEAIERSHQAFKTWSKTSANERTSLLKKWYELIVEHKEELADLITKENGKPYQEAVGEVLYGAGYIEWFAEEAKRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKPAPDTPLSAYELARLAYEAGIPKDVLQVVIGDGEEI 193
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_HYLLA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 8.761e-50 Identity = 97/180 (53.89%), Postives = 128/180 (71.11%), Query Frame = 3 Query: 237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV 776 V +PA+G + V+ G +E + A+ +A++AF SW +++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP GIP GV NV+ Sbjct: 78 VQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_PONPY (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.494e-49 Identity = 97/180 (53.89%), Postives = 127/180 (70.56%), Query Frame = 3 Query: 237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV 776 V +PA+G + V+ G +E + A+ +A++AF SW +++A ERS LRKWY L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP GIP GV NV+ Sbjct: 78 VQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKERSSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_HUMAN (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.549e-49 Identity = 96/180 (53.33%), Postives = 127/180 (70.56%), Query Frame = 3 Query: 237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV 776 V +PA+G + V+ G +E + A+ +A++AF W +++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP GIP GV NV+ Sbjct: 78 VQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: SSDH_PANPA (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.329e-49 Identity = 96/180 (53.33%), Postives = 127/180 (70.56%), Query Frame = 3 Query: 237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVV 776 V +PA+G + V+ G +E + A+ +A++AF W +++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP GIP GV NV+ Sbjct: 78 VQDPASGAALGMVADCGVREARAAVRAAYEAFCCWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVI 257 The following BLAST results are available for this feature:
BLAST of CK932658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932658 ID=CK932658; Name=CK932658; organism=Citrus sinensis; type=EST; length=797bpback to top |