CK932721

Overview
NameCK932721
Unique NameCK932721
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1478 contig Csv1_Contig1478:1..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_ARATH (Mitochondrial import inner membrane translocase subunit Tim9 OS=Arabidopsis thaliana GN=TIM9 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.566e-39
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 2
Query:  158 MDKNMLAGLDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNSQAATQE 436
            MD +M+AGLDGLPE+DKA+ A+MID LQLRDSLRMYNSLVERCF DCVD+FTRK+LQ+QEETCVMRCAEKFLKH+MRVGMRFAELN  A TQ+
Sbjct:    1 MDASMMAGLDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQEETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_ORYSJ (Mitochondrial import inner membrane translocase subunit Tim9 OS=Oryza sativa subsp. japonica GN=TIM9 PE=3 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.377e-36
Identity = 72/93 (77.42%), Postives = 79/93 (84.95%), Query Frame = 2
Query:  158 MDKNMLAGLDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNSQAATQE 436
            MDK+ML  LDGLPE+DK R AAM+D LQ+RDSLRMYNSLVERCF DCVD F RKTL +QEE+CV RCAEKFLKHSMRVGMRFAELN   AT +
Sbjct:    1 MDKSMLGDLDGLPEEDKMRMAAMVDQLQIRDSLRMYNSLVERCFTDCVDTFRRKTLDKQEESCVRRCAEKFLKHSMRVGMRFAELNQGVATPD 93          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_MESCR (Mitochondrial import inner membrane translocase subunit Tim9 OS=Mesembryanthemum crystallinum GN=TIM9 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 2
Query:  158 MDKNMLAGLDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNSQAATQE 436
            MDKNML  LD LPE+DK + A+MI+ LQ+RDSLRMYN+LVERCF DCVD+F RKTL +QEETCV RCAEKFLKHSMRVG+RFAELN  AAT +
Sbjct:    1 MDKNMLGDLDNLPEEDKLKMASMIEQLQIRDSLRMYNNLVERCFTDCVDSFRRKTLDKQEETCVKRCAEKFLKHSMRVGLRFAELNQGAATTD 93          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_ZYGBA (Mitochondrial import inner membrane translocase subunit Tim9 OS=Zygosaccharomyces bailii GN=TIM9 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18
Identity = 39/79 (49.37%), Postives = 60/79 (75.95%), Query Frame = 2
Query:  182 LDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNS 418
            +D L  +++   + +I+H Q++D +R+Y++LVERCF DCV++FT   L  +E+TC+ RC+EKFLKHS RVG+RF E N+
Sbjct:    1 MDSLNPREQQEFSKLIEHKQMKDFMRLYSNLVERCFTDCVNDFTSSKLTSKEQTCISRCSEKFLKHSERVGLRFQEQNA 79          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_ASHGO (Mitochondrial import inner membrane translocase subunit TIM9 OS=Ashbya gossypii GN=TIM9 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.417e-18
Identity = 38/79 (48.10%), Postives = 59/79 (74.68%), Query Frame = 2
Query:  182 LDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNS 418
            +D L  +++     +++  Q++D +R+Y++LVERCF+DCV++FT   L  +E+TC+MRC+EKFLKHS RVG RF E N+
Sbjct:    1 MDALNSREQQEFQRVVEQKQMKDFMRLYSNLVERCFSDCVNDFTSSKLTSKEQTCIMRCSEKFLKHSERVGQRFQEQNA 79          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_YEAST (Mitochondrial import inner membrane translocase subunit TIM9 OS=Saccharomyces cerevisiae GN=TIM9 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 2
Query:  182 LDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNS 418
            +D L  +++     +++  Q++D +R+Y++LVERCF DCV++FT   L  +E+TC+M+C+EKFLKHS RVG RF E N+
Sbjct:    1 MDALNSKEQQEFQKVVEQKQMKDFMRLYSNLVERCFTDCVNDFTTSKLTNKEQTCIMKCSEKFLKHSERVGQRFQEQNA 79          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_YARLI (Mitochondrial import inner membrane translocase subunit TIM9 OS=Yarrowia lipolytica GN=TIM9 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 2
Query:  182 LDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNS 418
            +D L  +++     +++  Q++D +R+Y+SLV+RCF DCV++FT K L  +EE+C+ +C+EKFLKHS RVG RF E N+
Sbjct:    1 MDQLNNREQQEFQQLVEQKQMKDFMRLYSSLVQRCFTDCVNDFTSKALSSREESCLEKCSEKFLKHSERVGQRFQEQNA 79          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_KLULA (Mitochondrial import inner membrane translocase subunit TIM9 OS=Kluyveromyces lactis GN=TIM9 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 2
Query:  182 LDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNS 418
            +D L  +++     +++  Q++D +R+Y++LVERCF+DCV++FT   L  +E+ C+MRC+EKFLKHS RVG RF E N+
Sbjct:    1 MDQLNGKEQQEFQKIVEQKQMKDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCSEKFLKHSERVGQRFQEQNA 79          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_CANGA (Mitochondrial import inner membrane translocase subunit TIM9 OS=Candida glabrata GN=TIM9 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.022e-16
Identity = 36/79 (45.57%), Postives = 57/79 (72.15%), Query Frame = 2
Query:  182 LDGLPEQDKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNS 418
            +D L  +++     +++  Q++D +R+Y+ LVERCF DCV++FT   L  +EE+C+++C+EKFLKHS RVG RF E N+
Sbjct:    1 MDQLNAKEQQEFQKLVEQKQMKDFMRLYSGLVERCFTDCVNDFTSSKLTSKEESCILKCSEKFLKHSERVGQRFQEQNA 79          
BLAST of CK932721 vs. ExPASy Swiss-Prot
Match: TIM9_CRYNE (Mitochondrial import inner membrane translocase subunit TIM9 OS=Cryptococcus neoformans GN=TIM9 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 2
Query:  203 DKARTAAMIDHLQLRDSLRMYNSLVERCFNDCVDNFTRKTLQRQEETCVMRCAEKFLKHSMRVGMRFAELNSQ 421
            ++A  + +I+  Q++D +R+Y+ LVE+CFN C  +FT K L   E TCV  C +KFLKHS RVG RFAE N++
Sbjct:   10 EQAHMSKVIEKKQMQDFMRLYSGLVEKCFNACAQDFTSKALTTNETTCVQNCTDKFLKHSERVGARFAEHNAE 82          
The following BLAST results are available for this feature:
BLAST of CK932721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
TIM9_ARATH5.566e-3981.72Mitochondrial import inner membrane translocase su... [more]
TIM9_ORYSJ3.377e-3677.42Mitochondrial import inner membrane translocase su... [more]
TIM9_MESCR2.189e-3575.27Mitochondrial import inner membrane translocase su... [more]
TIM9_ZYGBA1.091e-1849.37Mitochondrial import inner membrane translocase su... [more]
TIM9_ASHGO5.417e-1848.10Mitochondrial import inner membrane translocase su... [more]
TIM9_YEAST1.207e-1746.84Mitochondrial import inner membrane translocase su... [more]
TIM9_YARLI4.585e-1746.84Mitochondrial import inner membrane translocase su... [more]
TIM9_KLULA7.822e-1746.84Mitochondrial import inner membrane translocase su... [more]
TIM9_CANGA1.022e-1645.57Mitochondrial import inner membrane translocase su... [more]
TIM9_CRYNE1.927e-1549.32Mitochondrial import inner membrane translocase su... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_D02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932721 ID=CK932721; Name=CK932721; organism=Citrus sinensis; type=EST; length=697bp
GCGGGGGAGAAAGAGAAAGGAAAAGAGGANNNAGAGGAATACGAGACGAC
AACGTATTGGTGACTGAAGGATAAAAGAGGAAAGAAAAGCCCTCTTTGCC
AAAACCCCACCTCTGAGTTCTCAGTTCAACAACATTCAACACAGAAAAGG
AGCCGGAATGGACAAGAACATGTTGGCTGGACTTGACGGTCTTCCCGAAC
AGGACAAGGCCAGAACGGCTGCCATGATCGACCATCTTCAATTACGGGAC
AGTTTGAGGATGTACAACTCCCTTGTGGAGAGATGTTTCAACGATTGTGT
GGACAACTTTACACGCAAGACCCTACAGAGGCAAGAGGAGACCTGCGTCA
TGCGTTGTGCTGAGAAATTTCTGAAGCACTCAATGCGCGTTGGTATGAGG
TTTGCAGAACTCAATTCACAAGCAGCTACACAAGAATAGTATCCCCAGAC
GACCATTAACGGCGCCAAGAAACCATTTGGTTTATTCCTGTAGAATTTCT
TTTGGATCAAATTAGTGGCTATTAATTTTCTGCTTTTGCCATCAGTGGAA
GCCCAAGTTTGCGGTAGGATTCATAATCATCGTCTGAAAAATCATTTTTA
CACATTTTATCATGGCTTCACATATTGAATAATTGAATCAAATATAACGG
AATTCCATCTTAGAATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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