CK932722

Overview
NameCK932722
Unique NameCK932722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13367 contig Csv1_Contig13367:54..834. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.976e-28
Identity = 61/137 (44.53%), Postives = 87/137 (63.50%), Query Frame = 1
Query:  133 PNPKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTVAPGRERSRVNLTSYNGISSETRYANSMGFMKAEPMSGCAEVLRLYHEED 543
            PN   + ++GRVYCDTC+AGF T  T YIAGAKV++ECK   + ++  + +G TD+TGTY I + + H++ +C  VLV+SP  DC  V   R+R+ V LT   GIS   R AN +G+ K  P+  CA +L+    +D
Sbjct:   30 PNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVGISDSLRPANPLGYFKDVPLPVCAALLKQLDSDD 166          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: OLEE1_BETVE (Olee1-like protein OS=Betula verrucosa PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.030e-27
Identity = 56/129 (43.41%), Postives = 86/129 (66.67%), Query Frame = 1
Query:  148 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTVAPG---RERSRVNLTSYNGISSETRYANSMGFMKAEPMSGCAEVLR 525
            F VEG+VYCD C+  F T  +TY+ GAKV +EC++R+   ++YS + +TD +GTY+I V  DH++++C+  L  S   DC  V+     ++ +R++LT  NGIS+  R AN +GFMK +P+  CA+ LR
Sbjct:   27 FFVEGKVYCDNCRTQFVTKLSTYMKGAKVSLECRNREGGTLIYSSDSETDKSGTYRIPVDGDHEEEICEIALKKSSDPDCSEVSKDPFLKKSARISLTKNNGISTPVRLANPLGFMKKKPLPECAKALR 155          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: LAT52_SOLLC (Anther-specific protein LAT52 OS=Solanum lycopersicum GN=LAT52 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.316e-26
Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 1
Query:  139 PKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTVAPGRERSRVNLTSYNGISSETRYANSMGFMKAEPMSGCAEVL 522
            P+ F VEG+VYCDTC+  FET  +  + GA VK++C++  +    +S EG TD  G YK+ V+ DH++ +C+  +V SP  DCK    G E++R+  +   GI +  R+AN + FMKAE + GC E L
Sbjct:   24 PEVFDVEGKVYCDTCRVQFETKLSENLEGATVKLQCRNISTEAETFSVEGVTDKDGKYKLTVNGDHENDICEVTVVKSPREDCKESVSGYEKARIECSDNVGIHNAVRFANPLFFMKAESVQGCKEAL 151          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.481e-25
Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 1
Query:  148 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTVAPGRERSRVNLTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLRLYHEED 543
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS NGI  +  RYAN + F + EP+  C  +L+ Y   D
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEIDQDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLKECGGILQAYDLRD 138          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.743e-24
Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 1
Query:  148 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTVAPGRERSRVNLTSYNGISSE-TRYANSMGFMKAEPMSGCAEVLRLY 531
            F V GRVYCD C+AGFET  +  + GA V V+C+     +     E  TD  G YKI + +DHQ+++C+ VL  SP   C  +   R+R+RV LTS  GI  +  RYAN + F + EP+  C  +L+ Y
Sbjct:    6 FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEIDQDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLKECGGILQAY 134          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.778e-23
Identity = 53/129 (41.09%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  148 FSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTVAP---GRERSRVNLTSYNGISSETRYANSMGFMKAEPMSGCAEVLR 525
            F V+G VYCDTC+  F T  +T + GA VK+EC++  +    +  E  TD  G Y I V+ D +D +C+  LV SP+++C  V+     ++ ++V+LTS NG +S+ R AN++GFM+ EP+  C EVL+
Sbjct:   30 FKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLTSNNGEASDIRSANALGFMRKEPLKECPEVLK 158          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: ALL1_OLEEU (Major pollen allergen OS=Olea europaea PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 6.324e-21
Identity = 47/131 (35.88%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  130 RPNPKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTVAPGRERSRVNLT-SYNGISSETRYANSMGFMKAEPMSGCAEV 519
            +P    F ++G+VYCDTC+AGF T  + +I GA ++++CKD+++  V ++  G T + G Y +LV  DH+++ C+  L+SS   DC  + P    ++ +L    N ++  TR  N +GF K E +  CA+V
Sbjct:    5 QPPVSQFHIQGQVYCDTCRAGFITELSEFIPGASLRLQCKDKENGDVTFTEVGYTRAEGLYSMLVERDHKNEFCEITLISSGRKDCNEI-PTEGWAKPSLKFKLNTVNGTTRTVNPLGFFKKEALPKCAQV 134          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: LIGV1_LIGVU (Major pollen allergen Lig v 1 OS=Ligustrum vulgare PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.319e-18
Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = 1
Query:  130 RPNPKPFSVEGRVYCDTCQAGFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTV-APGRERSRVNLTSYNGISSETRYANSMGFMKAEPMSGCAEV 519
            +P    F ++G+VYCDTC+A F T  + +I GA V+++CKD ++ +V ++  G T + G Y +L+  DH+++ C+  L+SS   DC  +   G  +  +     N ++  TR  N +GF+K E +  C +V
Sbjct:    5 QPPVSQFYIQGQVYCDTCRARFITELSEFIPGAGVRLQCKDGENGKVTFTEVGYTKAEGLYNMLIERDHKNEFCEITLISSSRKDCDEIPTEGWVKPSLKFV-LNTVNGTTRTINPLGFLKKEVLPKCPQV 134          
BLAST of CK932722 vs. ExPASy Swiss-Prot
Match: PLAL1_PLALA (Major pollen allergen Pla l 1 OS=Plantago lanceolata PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.844e-12
Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  136 NPKPFSVEGRVYCDTCQA-GFETPATTYIAGAKVKVECKDRKSMQVLYSREGKTDSTGTYKILVSEDHQDQLCDAVLVSSPHNDCKTV---APGR-ERSRVNLTSYNGISSETRYANSMGFMKAEPMSGC 510
            +P  F VEG VYC+ C +       +  +AGA+V+++CKD  S +V+YS  G+TD  G Y++ V   H+D  C+  LV S   DC  +   A G  + S+V+L+    I+ +TR+   + F       GC
Sbjct:    5 HPAKFHVEGEVYCNVCHSRNLINELSERMAGAQVQLDCKD-DSKKVIYSIGGETDQDGVYRLPVVGYHED--CEIKLVKSSRPDCSEIPKLAKGTIQTSKVDLSKNTTITEKTRHVKPLSFRAKTDAPGC 131          
The following BLAST results are available for this feature:
BLAST of CK932722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PSC13_MAIZE6.976e-2844.53Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE... [more]
OLEE1_BETVE2.030e-2743.41Olee1-like protein OS=Betula verrucosa PE=2 SV=1[more]
LAT52_SOLLC1.316e-2642.19Anther-specific protein LAT52 OS=Solanum lycopersi... [more]
PHLB_PHLPR2.481e-2542.11Pollen allergen Phl p 11 OS=Phleum pratense PE=1 S... [more]
LOLB_LOLPR2.743e-2441.86Major pollen allergen Lol p 11 OS=Lolium perenne P... [more]
CHE1_CHEAL1.778e-2341.09Pollen allergen Che a 1 OS=Chenopodium album PE=1 ... [more]
ALL1_OLEEU6.324e-2135.88Major pollen allergen OS=Olea europaea PE=1 SV=2[more]
LIGV1_LIGVU1.319e-1833.59Major pollen allergen Lig v 1 OS=Ligustrum vulgare... [more]
PLAL1_PLALA1.844e-1234.62Major pollen allergen Pla l 1 OS=Plantago lanceola... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004530_D04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932722 ID=CK932722; Name=CK932722; organism=Citrus sinensis; type=EST; length=781bp
GGGGCTAGAATTCACTCATTTGCTCTCAATATTCAATCTTGTTCAGCTTC
CTTCATCTCCCATAAGACAATGGCTAGAATATTGTTGTTGATCGCTCTAT
GCGTGCTGCCGGCTCTGGTGAGCGCGGTCCGGCCCAACCCTAAACCGTTC
TCGGTTGAAGGACGCGTGTACTGCGACACCTGCCAAGCCGGCTTCGAGAC
CCCCGCCACCACCTACATCGCCGGTGCCAAGGTGAAGGTTGAATGCAAAG
ACAGGAAGTCAATGCAAGTATTATATAGCAGGGAAGGGAAAACAGACTCA
ACTGGAACATATAAGATCCTCGTTTCAGAAGACCATCAGGATCAACTTTG
CGATGCTGTCCTCGTTAGCAGCCCCCACAATGACTGCAAAACAGTTGCCC
CAGGGCGTGAGCGTTCCCGTGTGAACTTGACCAGTTACAACGGCATTTCT
TCTGAAACCCGATATGCCAATTCAATGGGCTTCATGAAGGCAGAGCCCAT
GTCTGGCTGTGCTGAGGTTCTCAGGCTATATCATGAGGAGGATGTGTAGA
GAATGGTGTGGCATGGTTTTTTCTATCGCTTTCCATTTGTTTAAGCTTTG
TGTTGGCCCAGCTATCATACTGTCTCTTCTATTAATAGTGCCTGGATGGC
TGTGTTGTTTCTATGTTTAGAGAATTCTTAATTTGTTGTTAAAGGACGTG
TACTCTATTAATTTATTTATATGCTGGTGCTTCTAGCTCTGAGATGTGTT
TTATCGCTAGTAATGCCTGATNNNTTTTCAC
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