CK932727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_NOSP7 (Translation initiation factor IF-3 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=infC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26 Identity = 59/129 (45.74%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 318 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 IR +R+ID +GI+P EA+Q+AE+ ELDLV++S ADPPV R MDY KY++E + D++E+KM Y I++HDY+VR+K A +FLKDGDKVK V +GRE + ++A +L+ Sbjct: 19 IRFPKIRVIDTDGAQLGIMPPQEALQLAEEKELDLVLISDKADPPVCRIMDYGKYKFE--QEKKAREARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLL 145
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_ANAVT (Translation initiation factor IF-3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=infC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.727e-25 Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 318 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 IR +R+ID + +GI+ EA+Q+AE+ ELDLV++S ADPPV R MDY KY++E + D++E+KM Y I++HDY+VR+K A +FLKDGDKVK V +GRE + ++A +L+ Sbjct: 19 IRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFE--QEKKAREARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLL 145
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_ANASP (Translation initiation factor IF-3 OS=Anabaena sp. (strain PCC 7120) GN=infC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.727e-25 Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 3 Query: 318 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 IR +R+ID + +GI+ EA+Q+AE+ ELDLV++S ADPPV R MDY KY++E + D++E+KM Y I++HDY+VR+K A +FLKDGDKVK V +GRE + ++A +L+ Sbjct: 19 IRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFE--QEKKAREARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLL 145
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_MICAN (Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) GN=infC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.562e-25 Identity = 60/147 (40.82%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 264 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 +R+ +DL + + IR +R+ID+ + +GI+ +EA+++AE+ ELDLV+VS A PPV R MDY KY++E + D++E+KM Y ID+HDY+VR+ A++FLK GDKVK + +GRE + N+A EL+ Sbjct: 4 KRRTTRDLPQIN----ERIRFPEIRVIDSDGSQLGIITPAEALRVAEEKELDLVLVSETASPPVCRIMDYGKYKFEQEKKAREAKKKQ--HTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDKVKATITFRGREIQHSNLAEELL 144
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_SYNY3 (Translation initiation factor IF-3 OS=Synechocystis sp. (strain PCC 6803) GN=infC PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25 Identity = 60/147 (40.82%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 264 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 +R+ ++DL + + IR +R+ID+ +GI+ +EA+++A++ LDLV+VS ADPPV R MDY KY++E + D++E+KM Y ID+HDY VR+ A++FLK GDKVK VN +GRE + ++A EL+ Sbjct: 4 KRRPQRDLPQIN----ERIRFPEIRVIDSDGAQLGIITPNEAMEIADERGLDLVLVSETADPPVCRIMDYGKYKFEQEKKAREAKKKQ--HTADVKEVKMRYKIDEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLAKELL 144
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_CYAP8 (Translation initiation factor IF-3 OS=Cyanothece sp. (strain PCC 8801) GN=infC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.496e-23 Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 264 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 +R+ ++DL + + IR +R+ID+ + VG++ EA+ +A++ ELDLV+VS A PPV R MDY KY++E + D++E+KM Y I + DY+VR+ A++FLK GDKVK V +GRE + N+A EL+ Sbjct: 4 KRRPQRDLPKIN----ERIRFPEIRVIDSDGSQVGVITPKEALSLAQEKELDLVLVSETAKPPVCRIMDYGKYKFE--QEKKAREAKKKQHTADVKEVKMRYKIGESDYNVRVNQAKRFLKSGDKVKATVTFRGREIQHANLAQELL 144
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_GLOVI (Translation initiation factor IF-3 OS=Gloeobacter violaceus GN=infC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.552e-23 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 3 Query: 318 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 IR +R IDA +GI+ +A+++AE+ LDLV+VS DA PPV R MDY KY++E + D++E+KM Y I +HDY VRL+ +FLKDGDKVK + +GRE + N+A +L+ Sbjct: 40 IRFPKIRAIDADGTQLGIMHPRDALRIAEERNLDLVVVSEDAQPPVCRIMDYGKYKFE--QEKRAKEARKKQHTADVKEVKMRYTIGEHDYQVRLRDTIRFLKDGDKVKATIMFRGREIQHANLAKDLL 166
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_SYNP2 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=infC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 57/147 (38.78%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 264 RRQKEKDLEEEQAFDIDGIRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 +R+ ++DL + + IR +R+I +GI+ +EA+ +AE+ +LDLV+VS A PPV R MDY KY++E + DL+E+KM Y I++HDY VR+ +A++FLK GDKVK + +GRE + N+A +L+ Sbjct: 4 KRRVKRDLPKIN----ERIRFPNIRVISGDGEQLGIMTPAEALAIAEEEDLDLVLVSETAKPPVCRIMDYGKYKFEQEKRAREAKKKQ--HNADLKEVKMRYKIEEHDYQVRVNSAQRFLKSGDKVKATITFRGREIQHSNLAQKLL 144
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_PROMA (Translation initiation factor IF-3 OS=Prochlorococcus marinus GN=infC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23 Identity = 55/129 (42.64%), Postives = 83/129 (64.34%), Query Frame = 3 Query: 318 IRSNTVRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 I+ +R++DA +GI+ + EA+ +A+D ELDLV+VS ADPPV R M+Y K+++E S ++ +++E+KM Y ID+HDY VR+ A +FLK GDKVK V +GRE + N+A L+ Sbjct: 23 IKYPKLRVVDADGTQLGIISREEALDVAQDRELDLVLVSEKADPPVCRIMNYGKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDEHDYQVRIGQATRFLKAGDKVKCTVIFRGREIQHTNLAESLL 149
BLAST of CK932727 vs. ExPASy Swiss-Prot
Match: IF3_SYNPW (Translation initiation factor IF-3 OS=Synechococcus sp. (strain WH7803) GN=infC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23 Identity = 53/124 (42.74%), Postives = 82/124 (66.13%), Query Frame = 3 Query: 333 VRLIDAQQNMVGIVPKSEAIQMAEDAELDLVIVSPDADPPVVRAMDYNKYRYEXXXXXXXXXXXSAANRMDLQELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELI 704 +R++DA +G++ + +A+++A++ ELDLV+VS ADPPV R MDY KY++E S ++ +++E+KM Y IDQHDY VR+ A++FLK GDKVK V +GRE + +A L+ Sbjct: 28 LRVVDADGTQLGVIDREKALEVAQERELDLVLVSEKADPPVCRIMDYGKYKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQHTALAETLL 149 The following BLAST results are available for this feature:
BLAST of CK932727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932727 ID=CK932727; Name=CK932727; organism=Citrus sinensis; type=EST; length=704bpback to top |