CK932735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932735 vs. ExPASy Swiss-Prot
Match: GOT1B_MOUSE (Vesicle transport protein GOT1B OS=Mus musculus GN=Golt1b PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 333 IFLYFFQNDI*LPSAFLVSL*ILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 668 +F FF + A L +LF+AG++ IGL+ T +FF +R K T WP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 19 VFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQRHKVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CK932735 vs. ExPASy Swiss-Prot
Match: GOT1B_HUMAN (Vesicle transport protein GOT1B OS=Homo sapiens GN=GOLT1B PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16 Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 333 IFLYFFQNDI*LPSAFLVSL*ILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 668 +F FF + A L +LF+AG++ IGL+ T +FF ++ K T WP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 19 VFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CK932735 vs. ExPASy Swiss-Prot
Match: GOT1B_BOVIN (Vesicle transport protein GOT1B OS=Bos taurus GN=GOLT1B PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16 Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 3 Query: 333 IFLYFFQNDI*LPSAFLVSL*ILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 668 +F FF + A L +LF+AG++ IGL+ T +FF ++ K T WP++GMI E YGF +LF GF+P + F++R+P+LG L P +RSF D+ Sbjct: 19 VFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKHKMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPGIRSFVDK 130
BLAST of CK932735 vs. ExPASy Swiss-Prot
Match: GOT1A_BOVIN (Vesicle transport protein GOT1A OS=Bos taurus GN=GOLT1A PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.691e-13 Identity = 44/106 (41.51%), Postives = 54/106 (50.94%), Query Frame = 3 Query: 333 IFLYFFQNDI*LPSAFLVSL*ILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFL---QRIPILGWLFQQ 641 IF F + S L +LF+ G+SL IGL+ T FF +R +KGT WP+LGM LETYGF LF GF+P FL IP L LFQ+ Sbjct: 19 IFFILFGMLLYFDSVLLAFGNLLFLTGLSLIIGLRRTFSFFFQRHKFKGTSFFLGGVVIVLLRWPLLGMCLETYGFFSLFRGFFPVAFGFLGSASNIPFLSALFQR 124
BLAST of CK932735 vs. ExPASy Swiss-Prot
Match: GOT1A_HUMAN (Vesicle transport protein GOT1A OS=Homo sapiens GN=GOLT1A PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13 Identity = 44/106 (41.51%), Postives = 54/106 (50.94%), Query Frame = 3 Query: 333 IFLYFFQNDI*LPSAFLVSL*ILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLFQQ 641 IF F + S L +LF+ G+SL IGL+ T FF +R KGT WP+LGM LETYGF LF GF+P FL IP LG LF++ Sbjct: 19 IFFILFGTLLYFDSVLLAFGNLLFLTGLSLIIGLRKTFWFFFQRHKLKGTSFLLGGVVIVLLRWPLLGMFLETYGFFSLFKGFFPVAFGFLGNVCNIPFLGALFRR 124
BLAST of CK932735 vs. ExPASy Swiss-Prot
Match: GOT1A_MOUSE (Vesicle transport protein GOT1A OS=Mus musculus GN=Golt1a PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13 Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 396 ILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQ---RIPILGWLFQQ 641 +LF+ G+SL IGL+ T FF +R KGT WP+LGM+LE YGFI LF GF+P + FL IP L LFQ+ Sbjct: 40 LLFLTGLSLIIGLRRTFAFFFQRHKLKGTSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGFLGSAFNIPFLSTLFQK 124
BLAST of CK932735 vs. ExPASy Swiss-Prot
Match: GOT1_CAEEL (Probable Golgi transport protein 1 OS=Caenorhabditis elegans GN=F41C3.4 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.512e-11 Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 3 Query: 294 VSLVTTKFPFQVFIFLYFFQNDI*LPSAFLVSL*ILFIAGVSLTIGLKSTMQFFMKRQNYKGTISXXXXXXXXXXXWPILGMILETYGFIVLFSGFWPTLSVFLQRIPILGWLFQQPFVRSFFDR 668 V L T F F +F+ + F L SA L +LFI G++ IG++ T+ FF + + KG+I +P+ GMI E +GFIVLF GF P + L+ IP + + P +R DR Sbjct: 14 VGLTTFGF-FFIFLGVLMF-----LDSALLAIGNLLFIVGITFIIGVQRTLVFFFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTITYLPGIRQVLDR 132 The following BLAST results are available for this feature:
BLAST of CK932735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932735 ID=CK932735; Name=CK932735; organism=Citrus sinensis; type=EST; length=780bpback to top |