CK932764

Overview
NameCK932764
Unique NameCK932764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932764_ssr685 microsatellite CK932764_ssr685:685..699. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6506 contig Csv1_Contig6506:51..935. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_ARATH (Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.441e-83
Identity = 152/235 (64.68%), Postives = 184/235 (78.30%), Query Frame = 3
Query:    3 GNGEARWESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIMLKHASXXXXXXXXRRD 707
            G+    ++SLKNF QISP VQ+HLK+VYL+LCCALVASA G YLH+LWNIGG+LT    IG+M+WLL+ P YE +KR+SLL  +A+ +GAS+GPLI +AI +DPSILI+AFVGT +AF CFS AAM+ARRREY                  FASSIFGGS +IFKFELYFGLL+FVGY+VVDTQ+IIEKAH GD+DYVKH+LTLFTDFVAVFVRILIIMLK+++        RR+
Sbjct:   13 GSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLWNIGGILTTIGCIGTMIWLLSCPPYEHQKRLSLLFVSAVLEGASVGPLIKVAIDVDPSILITAFVGTAIAFVCFSAAAMLARRREYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMDYVKHSLTLFTDFVAVFVRILIIMLKNSADKEEKKKKRRN 247          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_ORYSJ (Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN=BI1 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.485e-72
Identity = 133/218 (61.01%), Postives = 166/218 (76.15%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIMLKHAS 674
            ++SLKNF QISP VQSHLK VYL+LC AL ASA G YLH+  NIGG+LT+   +GS+ WL + P +EE+KR  +L+A AL +GAS+GPLI LA+  D SIL++AFVGT +AF CF+ AA+VA+RREY                  FA+SIFG ST  F FE+YFGLL+F+GY+V DTQ+IIE+AH GD+DY+KHALTLFTDFVAV VRIL+IMLK+AS
Sbjct:   20 YDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVALNIGGMLTMLGCVGSIAWLFSVPVFEERKRFGILLAAALLEGASVGPLIKLAVDFDSSILVTAFVGTAIAFGCFTCAAIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHALTLFTDFVAVLVRILVIMLKNAS 237          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_BOVIN (Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.360e-40
Identity = 88/217 (40.55%), Postives = 132/217 (60.83%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +G M+WL+ATP S+E E+KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + FTCF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H + LF DFV +F ++++I+
Sbjct:   10 FDALFKFSHITPSTQQHLKKVYASFALCMFVAAAGAYIHVVTHFIQAGLLSALGSLGLMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSAMSLMLLSSL-GNLFFGSVWLFQANLYMGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCVDLFLDFVTLFRKLMMIL 225          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_PIG (Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.694e-40
Identity = 88/217 (40.55%), Postives = 132/217 (60.83%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +G M+WL+ATP S+E E+KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + FTCF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H + LF+DFV +F ++++I+
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSAMSLMVLSSL-GNLFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCVDLFSDFVTLFRKLMMIL 225          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_MOUSE (Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.712e-40
Identity = 87/217 (40.09%), Postives = 131/217 (60.37%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++L I ++PSIL +AF+GT + FTCFS++A+ ARRR Y                    + +F GS  +F+  LY GLLV  G+++ DTQ IIEKA  GD DY+ H + LF DFV +F ++++I+
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAVNPSILPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMLLSSLGN-LFFGSIWLFQANLYLGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCVDLFLDFVTLFRKLMLIL 225          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_PAROL (Probable Bax inhibitor 1 OS=Paralichthys olivaceus GN=tmbim6 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.826e-39
Identity = 85/217 (39.17%), Postives = 128/217 (58.99%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP--SYEEKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            ++SL  F QIS   Q HLK VY SL   +  +A G Y+H++  +  GG+L+V   +G M WL  TP  S  EKKR+++L   A   G  + P +D  I I+PSI+++AF+GT + F CF+++A+ A+RR Y                    +  FG S  +FK  +Y GLL+  G+++ DTQ IIEKA  GD DYV H++ LF DF+ +F ++++I+
Sbjct:   10 FDSLFKFSQISHSTQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGMLSVLGSLGMMFWLAMTPHNSETEKKRLAILAGFAFLTGVGLCPTLDFVIAINPSIIVTAFLGTSVIFVCFTLSALYAKRRSYLFLGGTLMSGLSILFLMSMMNMFFG-SVMLFKAHMYLGLLIMCGFVLXDTQLIIEKAENGDKDYVWHSVDLFLDFITIFRKLMVIL 225          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_HUMAN (Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.832e-38
Identity = 84/217 (38.71%), Postives = 130/217 (59.91%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + FTCF+++A+ ARRR Y                    + +F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H + LF DF+ VF ++++I+
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGN-VFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMIL 225          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_RAT (Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.392e-38
Identity = 87/217 (40.09%), Postives = 129/217 (59.45%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +  M+ L+ATP S+E E+KR+ LL   A   G  +GP ++L I I+PSIL +AF+GT + FTCFS++A+ ARRR Y                    + +F GS  +F+  LY GLLV  G+++ DTQ IIEKA  GD DY+ H + LF DFV +F ++++I+
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALALMICLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAINPSILPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMFVSSLGN-LFFGSIWLFQANLYMGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCIDLFLDFVTLFRKLMLIL 225          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_PONAB (Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 5.329e-38
Identity = 83/217 (38.25%), Postives = 130/217 (59.91%), Query Frame = 3
Query:   21 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATP-SYE-EKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP S+E E+KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + FTCF+++A+ ARRR Y                    + +F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H + LF DF+ +F ++++I+
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCITVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGN-VFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITLFRKLMMIL 225          
BLAST of CK932764 vs. ExPASy Swiss-Prot
Match: BI1_DROME (Probable Bax inhibitor 1 OS=Drosophila melanogaster GN=CG7188 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 64/207 (30.92%), Postives = 107/207 (51.69%), Query Frame = 3
Query:   54 PVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEK-----KRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFTCFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVKHALTLFTDFVAVFVRILIIM 659
            P V+ HL +VY+ L     A+A G  L +   +   L V A + ++V +L    Y++       R+ +L A     G ++GPL+     I+P+I++SA  GT + F   S++A++A + +Y                    + +F  S  +   +LY G+ V   +IV DTQ+I+EK   G+ D V+HAL LF D +++F R+LII+
Sbjct:   25 PYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLD--LGVLAAVATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVFK-SYFVQVTQLYVGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHALDLFFDVLSMFRRLLIIL 228          
The following BLAST results are available for this feature:
BLAST of CK932764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BI1_ARATH2.441e-8364.68Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE... [more]
BI1_ORYSJ1.485e-7261.01Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN... [more]
BI1_BOVIN4.360e-4040.55Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1[more]
BI1_PIG5.694e-4040.55Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1[more]
BI1_MOUSE9.712e-4040.09Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=... [more]
BI1_PAROL2.826e-3939.17Probable Bax inhibitor 1 OS=Paralichthys olivaceus... [more]
BI1_HUMAN1.832e-3838.71Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=... [more]
BI1_RAT2.392e-3840.09Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=... [more]
BI1_PONAB5.329e-3838.25Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=... [more]
BI1_DROME2.938e-2030.92Probable Bax inhibitor 1 OS=Drosophila melanogaste... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_A07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932764 ID=CK932764; Name=CK932764; organism=Citrus sinensis; type=EST; length=885bp
GGGGTAACGGCGAAGCCCGCTGGGAGTCCTTGAAAAACTTTCACCAGATC
TCTCCCGTCGTCCAGTCTCACCTTAAGCAGGTTTATCTGTCATTATGCTG
TGCACTGGTGGCATCAGCCACTGGGGTCTACCTCCATCTCCTCTGGAACA
TTGGTGGCTTACTTACGGTTTTTGCAATGATTGGATCAATGGTTTGGCTT
CTCGCAACCCCTAGTTATGAAGAGAAAAAGAGGGTTTCTCTGCTCATGGC
TACCGCTCTCTTTAAAGGTGCATCAATTGGTCCTTTGATTGATCTCGCCA
TTCAAATTGACCCAAGCATTCTGATATCTGCATTTGTGGGAACCGGGCTG
GCTTTCACTTGTTTTTCTGTAGCTGCCATGGTTGCAAGGCGGAGAGAGTA
TCTCTATCTTGGTGGCTTGCTTTCATCAGGCCTGTCCATGCTTCTTTGGT
TGCATTTTGCTTCCTCTATCTTTGGTGGTTCAACAGCTATCTTCAAGTTT
GAGTTATACTTTGGGCTGTTGGTGTTTGTTGGCTACATCGTGGTGGATAC
CCAGGATATAATTGAGAAAGCTCACTTTGGAGACTTGGATTATGTCAAGC
ATGCCCTGACTCTTTTCACTGACTTTGTTGCTGTCTTTGTTCGTATTCTC
ATAATCATGTTGAAGCATGCATCTGAGAAAGAGGAGAAGAAGAAGAAGAG
GAGAGACTGAATCTCTCGGTAGCTGGACGGACAGTGCTTGTTTAAGTAAG
GGTTGCAGAACAACTAAATTTGTTGTGTATATTCTTGTGCTTACTTCTCT
TCTCCAAGCTGCACCTCTCTTAACAATCAGATGTAATACATGGGGTTAGT
TGTGTTCGCTAATTTTTGCTATTTTGCTGCTTGAC
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