CK932832

Overview
NameCK932832
Unique NameCK932832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932832_ssr277 microsatellite CK932832_ssr277:277..288. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig4134 contig Csv1_Contig4134:11..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE_CITUN (V-type proton ATPase subunit E OS=Citrus unshiu GN=VATE PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.727e-93
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP
Sbjct:    1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 176          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE_CITLI (V-type proton ATPase subunit E OS=Citrus limon GN=VATE PE=2 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 1.768e-92
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLK LIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP
Sbjct:    1 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKDLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 176          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE_GOSHI (V-type proton ATPase subunit E OS=Gossypium hirsutum GN=VATE PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 2.740e-77
Identity = 150/176 (85.23%), Postives = 164/176 (93.18%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            M+DADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYE+KEKQVEIRKKIEYSMQLNASRIKVLQAQDD+V+ M E+ASK+ LNVS DH+ YK+LLK LIVQSL+RLKEP VLLRCRK+D HLVESVL+SAKEEYA K+ VHPPEIIVD  ++LPPGP
Sbjct:    1 MSDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNAMKESASKDFLNVSHDHHVYKRLLKDLIVQSLVRLKEPGVLLRCRKEDLHLVESVLDSAKEEYASKVNVHPPEIIVD-DVHLPPGP 175          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE_SPIOL (V-type proton ATPase subunit E OS=Spinacia oleracea GN=VATE PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.122e-73
Identity = 142/176 (80.68%), Postives = 158/176 (89.77%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            MND DV KQIQQMVRFIRQEAEEKANEISV+AEEEFNIEKLQLVEAEKKKIR EYERKEKQV++R+KIEYSMQLNASRIKVLQAQDDLV++M E A+KE+L VS DH+ YK+LLK L+VQSLLRL+EP VLLRCR+DD HLVE VL SAKEEYA+K +VH PEIIVD  I+LP GP
Sbjct:    1 MNDTDVQKQIQQMVRFIRQEAEEKANEISVAAEEEFNIEKLQLVEAEKKKIRPEYERKEKQVQVRRKIEYSMQLNASRIKVLQAQDDLVNSMKEEAAKELLRVSGDHHHYKRLLKELVVQSLLRLREPGVLLRCREDDVHLVEHVLNSAKEEYAEKAEVHTPEIIVD-SIHLPAGP 175          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE1_ARATH (V-type proton ATPase subunit E1 OS=Arabidopsis thaliana GN=VHA-E1 PE=1 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 2.484e-70
Identity = 135/176 (76.70%), Postives = 157/176 (89.20%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            MND DVS+QIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQ+YE+KEKQ ++RKKI+YSMQLNASRIKVLQAQDD+V+ M + A+K++LNVSRD  +YK+LLK LIVQ LLRLKEP+VLLRCR++D  LVE+VL+ AKEEYA K +VH PE+ VD  I+LPP P
Sbjct:    1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEKQADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQCLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEYAGKAKVHAPEVAVDTKIFLPPPP 176          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE_MESCR (V-type proton ATPase subunit E OS=Mesembryanthemum crystallinum GN=VATE PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 7.991e-69
Identity = 138/176 (78.41%), Postives = 152/176 (86.36%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            MND DV  QIQQMVRF+RQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERK KQV++R+KIEYSMQLNASRIKVLQAQDDLV+ M EAASKE+L VS DH+ Y+ LLK LIVQSLLRLKEPAVLLRCR++D H V  VL SA+EEY +K  V  PE+IVD  I+LPP P
Sbjct:    1 MNDTDVQNQIQQMVRFMRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKAKQVDVRRKIEYSMQLNASRIKVLQAQDDLVNAMKEAASKELLLVSGDHHQYRNLLKELIVQSLLRLKEPAVLLRCREEDKHHVHRVLHSAREEYGEKACVSHPEVIVD-DIHLPPAP 175          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE3_ARATH (V-type proton ATPase subunit E3 OS=Arabidopsis thaliana GN=VHA-E3 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.180e-68
Identity = 134/182 (73.63%), Postives = 155/182 (85.16%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSR------DHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            MNDAD S QIQQMVRFIRQEAEEKANEIS+S+EEEFNIEKLQLVEAEKKKIRQEYE+KEKQV++RKKI+YSMQLNASRIKVLQAQDD+V+ M E A+K++L VS+       H+ YK LLK LIVQ LLRLKEPAVLLRCR++D  +VES+L+ A EEY +K +VH PEIIVD  I+LPP P
Sbjct:    1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLLKDLIVQCLLRLKEPAVLLRCREEDLDIVESMLDDASEEYCKKAKVHAPEIIVDKDIFLPPAP 182          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE2_ARATH (V-type proton ATPase subunit E2 OS=Arabidopsis thaliana GN=VHA-E2 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.360e-65
Identity = 122/176 (69.32%), Postives = 154/176 (87.50%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 665
            MNDADVSKQIQQMVRFIRQEAEEKANEIS+SAEEEFNIE+LQL+E+ K+K+RQ+Y+RK KQV+IRK+I+YS QLNASRIK LQAQDD+V+ M ++A+K++L VS D N+YKKLLK LI++SLLRLKEP+VLLRCR+ D  +VESV+E AK +YA+K +V  P+I +D  ++LPP P
Sbjct:    1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLKQVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIESLLRLKEPSVLLRCREMDKKVVESVIEDAKRQYAEKAKVGSPKITIDEKVFLPPPP 176          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE_MANSE (V-type proton ATPase subunit E OS=Manduca sexta GN=VHA26 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.122e-37
Identity = 84/174 (48.28%), Postives = 120/174 (68.97%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPP 659
            ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQVE++KKI+ S  LN +R+KVL+ ++D V N+++ A K +  V +D   Y  LL  LIVQ+L +L EP V LR R+ D  LVES+L  A+++Y  K++     + +D+  +LPP
Sbjct:    3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQKKIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDIKLYSDLLVTLIVQALFQLVEPTVTLRVRQADKALVESLLGRAQQDYKAKIK-KDVVLKIDNENFLPP 175          
BLAST of CK932832 vs. ExPASy Swiss-Prot
Match: VATE_DROME (V-type proton ATPase subunit E OS=Drosophila melanogaster GN=Vha26 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.376e-36
Identity = 80/172 (46.51%), Postives = 122/172 (70.93%), Query Frame = 3
Query:  138 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYL 653
            ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQVE++KKI+ S  LN +R+KVL+ ++D VS++++ A K +  V+++ + Y+ +L  LIVQ L ++ EP V+LRCR+ D  LV +VL +A E+Y  ++  +  E+ +D   +L
Sbjct:    3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPAAVEQYKAQINQN-VELFIDEKDFL 173          
The following BLAST results are available for this feature:
BLAST of CK932832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
VATE_CITUN2.727e-93100.00V-type proton ATPase subunit E OS=Citrus unshiu GN... [more]
VATE_CITLI1.768e-9299.43V-type proton ATPase subunit E OS=Citrus limon GN=... [more]
VATE_GOSHI2.740e-7785.23V-type proton ATPase subunit E OS=Gossypium hirsut... [more]
VATE_SPIOL9.122e-7380.68V-type proton ATPase subunit E OS=Spinacia olerace... [more]
VATE1_ARATH2.484e-7076.70V-type proton ATPase subunit E1 OS=Arabidopsis tha... [more]
VATE_MESCR7.991e-6978.41V-type proton ATPase subunit E OS=Mesembryanthemum... [more]
VATE3_ARATH5.180e-6873.63V-type proton ATPase subunit E3 OS=Arabidopsis tha... [more]
VATE2_ARATH5.360e-6569.32V-type proton ATPase subunit E2 OS=Arabidopsis tha... [more]
VATE_MANSE2.122e-3748.28V-type proton ATPase subunit E OS=Manduca sexta GN... [more]
VATE_DROME1.376e-3646.51V-type proton ATPase subunit E OS=Drosophila melan... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004529_A11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IIF_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932832 ID=CK932832; Name=CK932832; organism=Citrus sinensis; type=EST; length=665bp
GGGGATAGGAAGCCCCTTTANNNACNTGTTACTAACCTTACCCGCACCGT
CTGTCTCTCCTTAGCGATCGAAGAAAGTCGAATCGCTCTTCTCATTTTGA
TATCAACAATCTAATCAAATCAAAAGATCCCGCGAAAATGAACGACGCTG
ATGTTTCGAAGCAGATCCAGCAGATGGTGCGGTTTATCCGCCAAGAAGCT
GAAGAGAAAGCCAACGAGATCTCAGTTTCTGCCGAAGAAGAATTCAACAT
AGAGAAGTTGCAGCTGGTGGAAGCAGAGAAGAAGAAGATCAGACAAGAGT
ACGAGCGGAAAGAGAAGCAAGTCGAAATCAGAAAGAAGATTGAGTACTCC
ATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAAGCTCAGGATGATTT
GGTCAGTAATATGATGGAGGCAGCATCAAAGGAGGTTTTGAATGTGAGTC
GCGATCACAATTCATATAAGAAGCTTTTGAAGGGTCTTATTGTTCAGAGT
TTGCTCAGGCTGAAAGAGCCAGCTGTGTTACTGAGATGCCGCAAAGATGA
CCATCATTTGGTGGAGTCTGTTTTGGAGTCAGCAAAAGAGGAATATGCAC
AGAAATTGCAGGTTCACCCACCAGAGATAATTGTGGATCATCACATCTAT
CTTCCGCCTGGCCCT
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