CK932836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_GOSHI (60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.650e-46 Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTES 363 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRS IRRLREQTES Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_ORYSJ (60S ribosomal protein L37a OS=Oryza sativa subsp. japonica GN=Os01g0679700 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.767e-46 Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTES 363 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRS IRRLREQTE+ Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_PSEMZ (60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.035e-45 Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRS IRRLREQTE Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: R37A1_ARATH (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana GN=RPL37AB PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 8.990e-45 Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTES 363 MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRS IRRLREQTES Sbjct: 1 MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: R37A2_ARATH (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.827e-44 Identity = 84/91 (92.31%), Postives = 86/91 (94.51%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRS IRRLREQ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_BRARA (60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.435e-42 Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS-IIRRLREQTE 360 M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRS IRRLREQ E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSHTIRRLREQIE 92
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_OSTLU (60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain CCE9901) GN=RPL37a PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.371e-37 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 M KRTKK GIVGKYGTRYGASLRK +KK EVSQHSK+FC+FCGKY +KRKAVGIW CK C K KAGGAY+LNT +VTVRS IRRLRE TE Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_OSTTA (60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.007e-36 Identity = 71/91 (78.02%), Postives = 78/91 (85.71%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTE 360 M KRTKK GIVGKYGTRYGASLRK +KK EVSQHSK+FC+FCGKY +KR+AVGIW CK C K KAGGAY+LNT +VTVRS IRRLRE TE Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCCKGCNKTKAGGAYSLNTGGSVTVRSTIRRLREATE 91
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_CRYST (60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A PE=3 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 1.879e-34 Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLREQTES 363 M KRTKK GIVGKYGTRYGASLRK +KKME++QHSKY C+FCGK A+KR+AVGIWGCK C KV AGGA+ +T +AVTVRS +RRLRE ES Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVGIWGCKSCRKVVAGGAWVYSTMAAVTVRSAVRRLREMKES 92
BLAST of CK932836 vs. ExPASy Swiss-Prot
Match: RL37A_CHICK (60S ribosomal protein L37a OS=Gallus gallus GN=RPL37A PE=3 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.140e-31 Identity = 64/88 (72.73%), Postives = 72/88 (81.82%), Query Frame = 1 Query: 88 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSIIRRLRE 351 M KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KRKAVGIW C C K AGGA+T NT SAVTV+S IRRL+E Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88 The following BLAST results are available for this feature:
BLAST of CK932836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932836 ID=CK932836; Name=CK932836; organism=Citrus sinensis; type=EST; length=613bpback to top |