CK932873
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_ARATH (Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670 PE=2 SV=2) HSP 1 Score: 381.333 bits (978), Expect = 3.114e-105 Identity = 181/217 (83.41%), Postives = 194/217 (89.40%), Query Frame = 1 Query: 118 MATFGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKANILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVGS 768 MATFGA A A N NPNKS EV+ P+DS+SSL FSP+A+ILVATSWDNQVRCWEISRSG +AS PKASISHD PVLCS WKDDGTTVFSGG DKQ KMWPLLSGGQPVTVAMH+ PI +AWIP MNLLATGSWDKTLKYWDTRQ NPVHTQQLPD+CY L+V++PLMVVGTADRNL+VFNLQNPQTEFKRI SPLKYQTRCV AFPDQQGFLVGS Sbjct: 1 MATFGAPATA-NSNPNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGS 216
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_XENTR (mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.674e-58 Identity = 116/223 (52.02%), Postives = 146/223 (65.47%), Query Frame = 1 Query: 127 FGAAAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 FG+ A N NP K IEV+ PP DS+S L FSP N L+A SW N VRCWE+ +G ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAPIK V W+ P + + TGSWDK+LK+WDTR PNP+ T QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI+SPLK+Q RCVA F D+Q GF +GS Sbjct: 18 FGSTAT-DNHNPMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKSLKFWDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAEL1_PONAB (mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.567e-56 Identity = 111/220 (50.45%), Postives = 139/220 (63.18%), Query Frame = 1 Query: 136 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 +A N NP K IEV+ P DS+ L FSP N L+A SW N VRCWE+ SG ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_HUMAN (mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.567e-56 Identity = 111/220 (50.45%), Postives = 139/220 (63.18%), Query Frame = 1 Query: 136 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 +A N NP K IEV+ P DS+ L FSP N L+A SW N VRCWE+ SG ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_BOVIN (mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.777e-56 Identity = 111/215 (51.63%), Postives = 137/215 (63.72%), Query Frame = 1 Query: 151 NQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 N NP K IEV+ P DS+ L FSP N L+A SW N VRCWE+ SG ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAP+K V WI P + + TGSWDKTLK+WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAEL1_PIG (mRNA export factor OS=Sus scrofa GN=RAE1 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.016e-55 Identity = 110/215 (51.16%), Postives = 137/215 (63.72%), Query Frame = 1 Query: 151 NQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 N NP K IEV+ P DS+ L FSP N L+A SW N VRCWE+ SG ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_RAT (mRNA export factor OS=Rattus norvegicus GN=Rae1 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.016e-55 Identity = 110/215 (51.16%), Postives = 137/215 (63.72%), Query Frame = 1 Query: 151 NQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 N NP K IEV+ P DS+ L FSP N L+A SW N VRCWE+ SG ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_MOUSE (mRNA export factor OS=Mus musculus GN=Rae1 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.016e-55 Identity = 110/215 (51.16%), Postives = 137/215 (63.72%), Query Frame = 1 Query: 151 NQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 N NP K IEV+ P DS+ L FSP N L+A SW N VRCWE+ SG ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_DANRE (mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.327e-55 Identity = 107/215 (49.77%), Postives = 139/215 (64.65%), Query Frame = 1 Query: 151 NQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 + NP K +EV+ PP DS+S L FSP N L+ SW N VRCWE+ +G +VPKA H PVL W DDG+ VF+ DK KMW L S Q + +A H+ PI+ + WI P + + TGSWDKTLK+WDTR PNP+ + Q+P+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 25 SHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQ---TVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSN-QAIQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGS 235
BLAST of CK932873 vs. ExPASy Swiss-Prot
Match: RAE1L_MACFA (mRNA export factor OS=Macaca fascicularis GN=RAE1 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 6.584e-55 Identity = 110/220 (50.00%), Postives = 137/220 (62.27%), Query Frame = 1 Query: 136 AAVATNQNPNKSIEVSQPPSDSVSSLCFSPKA---NILVATSWDNQVRCWEISRSGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGRDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ----GFLVGS 768 +A N NP K IEV+ P DS+ L FSP N L+A SW N VRCWE+ SG ++PKA H PVL W DDG+ VF+ DK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+WDTR NP+ QLP+R Y V YP+ VV TA R L+V+ L+N +EF+RI SPLK+Q RCVA F D+Q GF +GS Sbjct: 20 SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERYYCADVIYPMAVVATAGRGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS 235 The following BLAST results are available for this feature:
BLAST of CK932873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932873 ID=CK932873; Name=CK932873; organism=Citrus sinensis; type=EST; length=769bpback to top |