CK932903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TPPC5_DICDI (Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum GN=trappc5 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 6.033e-60 Identity = 110/180 (61.11%), Postives = 146/180 (81.11%), Query Frame = 3 Query: 93 NVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREA 632 N++D+PLSKGK E+++S+FAFLFSE++QY Q ++ ELE++L D GY++G R+LELLC R+K ++RET+LLGILSF+H+TVWK LFGK ADSLEK TE +DEYMIS+ ++VN+FIS+PK + + NC AFVAGI+ G+L SA FPA VTAH V VEG++ P+T ILIKF EV+ R A Sbjct: 7 NIVDRPLSKGKGEINISSFAFLFSEMIQYCQDRIKAGHELEKKLSDMGYSIGPRLLELLCVREKNSKRETKLLGILSFIHTTVWKSLFGKPADSLEKSTEADDEYMISDNNMVVNKFISLPKHLSSLNCAAFVAGIIEGILCSAEFPARVTAHNVAVEGKRFPKTVILIKFNPEVIERNA 186
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TRS31_SCHPO (Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe GN=trs31 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.083e-44 Identity = 94/184 (51.09%), Postives = 129/184 (70.11%), Query Frame = 3 Query: 93 NVLDKPLSKGKQ-EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARLG 641 +V ++ L+K + +V+LS+FAF+FSEL+Q Q+QV I E E +L + GY VG +++EL+ R++ +RETR+LGIL ++HS+VWK LFGK ADSLEK E DEYMI + L+N+FIS+PK+M NC A++AGI+ G LDSA FP +AH VP+ Q RT ILIK V+ RE LG Sbjct: 27 SVYEQNLNKIRNSDVNLSSFAFIFSELIQRIQSQVSGIQEFEEKLNEHGYRVGQKLVELVVWRERNPKRETRILGILQYIHSSVWKYLFGKHADSLEKSKEASDEYMIVDNNPLLNKFISVPKEMNQLNCCAYLAGIIEGFLDSAQFPCKASAHSVPL-SQYPYRTVILIKLDPSVIAREEVLG 209
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TPPC5_CHICK (Trafficking protein particle complex subunit 5 OS=Gallus gallus GN=TRAPPC5 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.409e-42 Identity = 88/183 (48.09%), Postives = 123/183 (67.21%), Query Frame = 3 Query: 90 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 638 S +L++PL + + EVSLSAFA LF ELVQY Q +V ++AEL+ +L G+ VG R+L+ L R++G RRET++L +L FV VW+ LFGK AD LE+ + + Y + E+E LVN FIS+P++ T NC AF AG+V VL ++GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 10 SPLLERPLGRPRGEVSLSAFALLFCELVQYCQRRVYSVAELQSKLAQLGHQVGLRLLDPLVSRERGGRRETKVLSVLLFVKGPVWRALFGKEADKLEQANDDDKTYYVIEREPLVNTFISVPRENSTLNCAAFTAGLVEAVLGASGFPAKVTAHW-------HKGTTLMIKFEEGVIARDKSL 185
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TPPC5_HUMAN (Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.677e-42 Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 3 Query: 90 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 638 S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS+PK+ T NC +F AGIV VL +GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARDRAL 185
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TPPC5_BOVIN (Trafficking protein particle complex subunit 5 OS=Bos taurus GN=TRAPPC5 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.264e-41 Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 3 Query: 90 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 638 S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V +AEL+ RL G VGARVL+ L R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS+PK+ T NC +F AGIV VL +GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFTVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARDRAL 185
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TPPC5_MOUSE (Trafficking protein particle complex subunit 5 OS=Mus musculus GN=Trappc5 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.156e-41 Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 3 Query: 90 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRREARL 638 S +L++ L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS+PK+ T NC +F AGIV VL +GFPA VTAH+ TT++IKF E V+ R+ L Sbjct: 10 SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARDRAL 185
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TPPC5_PLAFA (Trafficking protein particle complex subunit 5 OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 79/177 (44.63%), Postives = 110/177 (62.15%), Query Frame = 3 Query: 99 LDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRRE 629 ++K L++ KQ+VSLSAF+ LFSE+VQY + +E L + G VG ++ E L +++K +R ++ IL+F+ VWK LF +D L K + EYMI +K +L+N+FI++PKD G NC AF AGIV G L S+ F A VTAH + EG TTI IKF EV+ RE Sbjct: 8 IEKELNRIKQDVSLSAFSILFSEMVQYCLYKSKRGYRIEDCLHEMGLRVGYKLNEYLTYKNKV-KRSINIINILTFISKHVWKYLFQHSSDLL-KSQDSIYEYMICDKNILLNKFINVPKDYGNINCAAFAAGIVEGFLCSSEFQADVTAHTIH-EGDDNYNTTIFIKFYPEVVERE 181
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TPPC5_PLAF7 (Trafficking protein particle complex subunit 5 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0358 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.685e-31 Identity = 79/177 (44.63%), Postives = 110/177 (62.15%), Query Frame = 3 Query: 99 LDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRRE 629 ++K L++ KQ+VSLSAF+ LFSE+VQY + +E L + G VG ++ E L +++K +R ++ IL+F+ VWK LF +D L K + EYMI +K +L+N+FI++PKD G NC AF AGIV G L S+ F A VTAH + EG TTI IKF EV+ RE Sbjct: 8 IEKELNRIKQDVSLSAFSILFSEMVQYCLYKSKRGYRIEDCLHEMGLRVGYKLNEYLTYKNKV-KRSINIINILTFISKHVWKYLFQHSSDLL-KSQDSIYEYMICDKNILLNKFINVPKDYGNINCAAFAAGIVEGFLCSSEFQADVTAHTIH-EGDDNYNTTIFIKFYPEVVERE 181
BLAST of CK932903 vs. ExPASy Swiss-Prot
Match: TRS31_YEAST (Transport protein particle 31 kDa subunit OS=Saccharomyces cerevisiae GN=TRS31 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 282 KGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLRRE 629 K RR+ ++L IL F+H T+W LF V+D L K +E ++EYMI + + +F IP + +C FV GI++G L +AGFP VTAH +P +G RT LI+F +VL RE Sbjct: 168 KMRRRDLKILDILQFIHGTLWSYLFNHVSDDLVKSSERDNEYMIVDNFPTLTQF--IPGE--NVSCEYFVCGIIKGFLFNAGFPCGVTAHRMP-QGGHSQRTVYLIQFDRQVLDRE 278 The following BLAST results are available for this feature:
BLAST of CK932903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932903 ID=CK932903; Name=CK932903; organism=Citrus sinensis; type=EST; length=849bpback to top |