CK933007

Overview
NameCK933007
Unique NameCK933007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933007_ssr314 microsatellite CK933007_ssr314:314..328. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1513 contig Csv1_Contig1513:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR7_ARATH (Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic OS=Arabidopsis thaliana GN=PUR7 PE=2 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 3.394e-73
Identity = 144/231 (62.34%), Postives = 165/231 (71.43%), Query Frame = 1
Query:  115 MAECMRTTLNPPKTPLHSNKILAPKLXXXXXXXXXGTKPNSSNSNNYPRISLSVMSXXXXXXXXXXXXXXXXXYLSLDAVISSNRKAELLGDIKGSLSNRLSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLV 807
            MA+C+R+TLNP +TP    +    K             P     N YP+    VMS                  LSLD +++SNRK E+LG IK SLSN LSETNL  TVPGLKS+ +GKVRDIYD GDYLVL+TTDR SAFDR LASIPFKGQVLNETSLWWF+ T+HITPNA++SSPD+NV IAKKCSV P+EFVVRG+VTGSTDTSLWTVYNKG+RNYCGN L DGLV
Sbjct:    1 MAQCVRSTLNPVRTPQSFTRKAYVKSPAFASVSFLRAVPEF---NKYPKPCSLVMSCQGKAQNQQEERPQ----LSLDDLVTSNRKGEVLGTIKDSLSNCLSETNLLATVPGLKSRIKGKVRDIYDAGDYLVLITTDRLSAFDRNLASIPFKGQVLNETSLWWFNNTQHITPNAIVSSPDRNVVIAKKCSVFPIEFVVRGYVTGSTDTSLWTVYNKGVRNYCGNELSDGLV 224          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR7_VIGAC (Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic (Fragment) OS=Vigna aconitifolia GN=PUR7 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.356e-66
Identity = 122/155 (78.71%), Postives = 138/155 (89.03%), Query Frame = 1
Query:  346 DAVISSNRKAELLGDI-KGSLSNRLSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGLV 807
            D++++S  + +++  I K ++SN LSETNLH TVPGL SKTRGKVRDIYD GDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWF++T+ I PNAV+S+PDKNVTIAKKCSV PVEFV RGFVTGSTDTSLWTVYNKG RNYCGN LPDG+V
Sbjct:   46 DSLVNSPHRNDVVDVIRKSAISNCLSETNLHNTVPGLVSKTRGKVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKQIVPNAVVSAPDKNVTIAKKCSVFPVEFVARGFVTGSTDTSLWTVYNKGARNYCGNVLPDGMV 200          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR7_LEGPL (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Legionella pneumophila (strain Lens) GN=purC PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.099e-42
Identity = 78/115 (67.83%), Postives = 92/115 (80.00%), Query Frame = 1
Query:  460 KTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            K +GKVRD YD GD L+LVTTDRQSAFDR LA++P+KGQVLN TS+WWF  T+ I PN +I+ PD NV IAKKC + PVEFVVRG+++GST TSLWT Y KG+R YCG   PDGL
Sbjct:   15 KYKGKVRDTYDLGDQLILVTTDRQSAFDRCLAAVPYKGQVLNLTSVWWFKNTQSIVPNHLIAVPDPNVAIAKKCKIFPVEFVVRGYISGSTSTSLWTQYQKGVREYCGITFPDGL 129          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR7_LEGPA (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Legionella pneumophila (strain Paris) GN=purC PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.047e-42
Identity = 77/115 (66.96%), Postives = 92/115 (80.00%), Query Frame = 1
Query:  460 KTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            K +GKVRD YD GD L+LVTTDRQSAFDR LA++P+KGQVLN TS+WWF  T+ I PN +I+ PD NV IAKKC + P+EFVVRG+++GST TSLWT Y KG+R YCG   PDGL
Sbjct:   15 KYKGKVRDTYDLGDQLILVTTDRQSAFDRCLAAVPYKGQVLNLTSVWWFKNTQSIVPNHLIAVPDPNVAIAKKCKIFPIEFVVRGYISGSTSTSLWTQYQKGVREYCGITFPDGL 129          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR72_AGRT5 (Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=purC2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.034e-29
Identity = 63/122 (51.64%), Postives = 88/122 (72.13%), Query Frame = 1
Query:  442 VPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            +P L +  RGKVR+ YD  D   ++++TDR SAFD+IL  IP+KGQVL +T+ +WF+QT+ I PN V+S PD NV I K+  ++PVE VVRG++ G+T TS+ T+Y KG R   G +LPDG+
Sbjct:    9 IPELPNYYRGKVRENYDLPDGNRIIISTDRLSAFDQILTCIPYKGQVLTQTARYWFEQTKDICPNHVVSYPDPNVVIGKRLDILPVEVVVRGYLAGTTGTSILTLYKKGERQMYGMSLPDGM 130          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR72_CAUCR (Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2 OS=Caulobacter crescentus GN=purC2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 66/122 (54.10%), Postives = 84/122 (68.85%), Query Frame = 1
Query:  442 VPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            +P L +  RGKVRD YD  D   V+V +DR SAFDR L ++P KGQVL ET+ +WFD T  I PN V++ PD NV I K+  ++PVE VVRG++ G+T TS+ T+YNKG R   G  LPDGL
Sbjct:   14 LPCLPNHYRGKVRDNYDLPDGRRVIVASDRLSAFDRNLCAVPGKGQVLTETARFWFDATADICPNHVVAYPDPNVLIGKRLKMLPVELVVRGYLAGTTSTSILTLYNKGERQMYGVTLPDGL 135          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR72_RHILO (Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2 OS=Rhizobium loti GN=purC2 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.070e-26
Identity = 58/122 (47.54%), Postives = 81/122 (66.39%), Query Frame = 1
Query:  442 VPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            +P L    +GKVR+ YD  D   +++ TDR SAFD IL SIPFKG++L +T+ +WF++T  I PN V+  PD NV +  +  ++PVE VVRG++ G+T TS+ T Y +G R   G  LPDGL
Sbjct:    9 IPELPGYYKGKVRENYDLADGRRIIIATDRLSAFDIILTSIPFKGEILTQTARYWFEETADICPNHVLEYPDPNVVVGTRLDILPVEIVVRGYLAGTTSTSILTRYRRGEREMYGMRLPDGL 130          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR7_PORGI (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Porphyromonas gingivalis GN=purC PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.446e-23
Identity = 62/136 (45.59%), Postives = 82/136 (60.29%), Query Frame = 1
Query:  403 LSNRLSETNLHLTVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRIL-ASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            +   L+ T+  L  PG K+   GKVRD+Y    D LV++ TDR SAFD +L A IP+KGQVLN+ +  + D TR I PN  I++PD  VTI  +C    VE V+RG++TGS     W  Y  G R  CG  LP+G+
Sbjct:    1 MKETLARTDFRL--PGQKAVYHGKVRDVYTLENDLLVMIATDRISAFDVVLPAGIPYKGQVLNQIAAHYLDATRDIVPNWKIATPDPMVTIGHRCEPFKVEMVIRGYITGSA----WRAYAAGERVLCGLPLPEGM 130          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR7_BACTN (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Bacteroides thetaiotaomicron GN=purC PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.221e-23
Identity = 58/129 (44.96%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  424 TNLHLTVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            T      PG KS   GKVRD+Y+  G+ LV+V TDR SAFD +L   IP+KGQ+LN+ +  + D T  I PN  +++PD  VT+   C   PVE +VRG++ GS     W  Y  G+R  CG  LPDG+
Sbjct:    5 TKTDFNFPGQKSVYHGKVRDVYNINGEKLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKMATPDPMVTVGVLCEGFPVEMIVRGYLCGSA----WRTYKSGVREICGVKLPDGM 129          
BLAST of CK933007 vs. ExPASy Swiss-Prot
Match: PUR7_BACFR (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Bacteroides fragilis GN=purC PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.495e-23
Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 1
Query:  424 TNLHLTVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRNYCGNALPDGL 804
            T      PG KS   GKVRD+Y+  G+ LV+V TDR SAFD +L   IP+KGQ+LN+ +  + D T  I PN  +++PD  VT+   C   PVE +VRG++ GS     W  Y  G+R  CG  LP+G+
Sbjct:    5 TKTDFNFPGQKSVYHGKVRDVYNINGEQLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKLATPDPMVTVGVLCEGFPVEMIVRGYLCGSA----WRAYKNGVREICGVKLPEGM 129          
The following BLAST results are available for this feature:
BLAST of CK933007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PUR7_ARATH3.394e-7362.34Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_VIGAC2.356e-6678.71Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_LEGPL3.099e-4267.83Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_LEGPA4.047e-4266.96Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR72_AGRT51.034e-2951.64Putative phosphoribosylaminoimidazole-succinocarbo... [more]
PUR72_CAUCR1.493e-2854.10Putative phosphoribosylaminoimidazole-succinocarbo... [more]
PUR72_RHILO1.070e-2647.54Putative phosphoribosylaminoimidazole-succinocarbo... [more]
PUR7_PORGI1.446e-2345.59Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_BACTN3.221e-2344.96Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_BACFR5.495e-2344.19Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_H03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933007 ID=CK933007; Name=CK933007; organism=Citrus sinensis; type=EST; length=809bp
GGGGGCGCCTTTAGGAGCCGAAGAGCAACAACGCGCAAAACCTCGGAAAC
CTGACGCTATGTCCATTTATTCAGCCACTTAGACTCACTGTAGAGACAAA
ATTTCAAAGCAACAATGGCTGAGTGTATGCGTACAACCTTAAACCCTCCA
AAAACCCCACTTCACAGCAACAAAATCTTAGCTCCAAAACTCTCATTCTC
ATCTTCTTTCTCTTCATTTGGAACAAAACCCAATTCTTCTAATTCAAACA
ATTATCCAAGAATCTCTCTATCTGTCATGTCCAACAAGAACCAGAACCAG
AACCAGAACCAAAACCACCACCACCACCAACAATACTTGTCTCTTGATGC
TGTGATTAGCAGCAATCGCAAAGCAGAGCTTCTTGGTGACATCAAAGGCT
CGCTTTCGAACCGTCTCTCCGAGACAAATCTTCACTTGACTGTTCCCGGT
CTCAAATCCAAAACCAGGGGCAAGGTGAGAGATATTTATGATGGCGGGGA
TTATCTTGTTCTGGTGACAACGGACCGCCAAAGTGCGTTCGATAGAATTC
TTGCTTCTATTCCCTTCAAAGGCCAGGTTCTTAATGAAACGAGTTTGTGG
TGGTTTGATCAAACTAGGCACATAACTCCAAATGCAGTCATTTCATCTCC
GGATAAAAATGTTACAATTGCGAAGAAGTGTTCTGTTATCCCTGTTGAAT
TTGTAGTCAGAGGTTTTGTGACTGGAAGTACTGATACCTCTCTGTGGACG
GTTTACAATAAAGGCATCCGAAATTATTGTGGCAATGCTCTCCCAGATGG
CTTGGTGAA
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