CK933038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPPC3_CHICK (Trafficking protein particle complex subunit 3 OS=Gallus gallus GN=TRAPPC3 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.271e-51 Identity = 95/165 (57.58%), Postives = 129/165 (78.18%), Query Frame = 2 Query: 167 ERVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 661 +++N+ELFTLTYGA V QL D E E+VNKQLD+MGYNIG+RLI++FLA+SNV RC DFRETA+VIAK+ FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M +V +++D L+GD E+++K ++++ + P Sbjct: 12 KKMNSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLP 176
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPPC3_RAT (Trafficking protein particle complex subunit 3 OS=Rattus norvegicus GN=Trappc3 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.398e-50 Identity = 93/165 (56.36%), Postives = 128/165 (77.58%), Query Frame = 2 Query: 167 ERVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 661 +++++ELFTLTYGA V QL D E E+VNKQLD+MGYNIG+RLI++FLA+SNV RC DFRETA+VIAK+ FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M E +++D L+GD E++++ ++++ + P Sbjct: 12 KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPPC3_MOUSE (Trafficking protein particle complex subunit 3 OS=Mus musculus GN=Trappc3 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.398e-50 Identity = 93/165 (56.36%), Postives = 128/165 (77.58%), Query Frame = 2 Query: 167 ERVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 661 +++++ELFTLTYGA V QL D E E+VNKQLD+MGYNIG+RLI++FLA+SNV RC DFRETA+VIAK+ FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M E +++D L+GD E++++ ++++ + P Sbjct: 12 KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDRMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSALIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPPC3_DICDI (Trafficking protein particle complex subunit 3 OS=Dictyostelium discoideum GN=trappc3 PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 4.090e-50 Identity = 101/174 (58.05%), Postives = 131/174 (75.29%), Query Frame = 2 Query: 143 GDAIFANVERVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQ-GLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 661 G+ +F VE++N+ELFTLTYGA V QL+ D E++E+VN +L+QMGYNIGIRLI+EFLAKS + RC DF ETAEVIAK+GFKMFLGV A V +WDA+ + +EDNPL+DFVELPD + LYY NIL GV+RGALEMV MK + T+++ L D E++V L + + + P Sbjct: 9 GNDVFNKVEKINSELFTLTYGALVTQLIKDYEDIEQVNIKLEQMGYNIGIRLIEEFLAKSGIGRCSDFIETAEVIAKVGFKMFLGVNAHVGDWDANRKEFHLTIEDNPLIDFVELPDQYKHKLYYSNILCGVMRGALEMVQMKVKCTFVKCTLSDDSTSEIKVVLEEVLSDMIP 182
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPPC3_HUMAN (Trafficking protein particle complex subunit 3 OS=Homo sapiens GN=TRAPPC3 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.976e-50 Identity = 92/165 (55.76%), Postives = 128/165 (77.58%), Query Frame = 2 Query: 167 ERVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYP 661 +++++ELFTLTYGA V QL D E E+VNKQLD+MG+NIG+RLI++FLA+SNV RC DFRETA+VIAK+ FKM+LG+T +++NW G S+ILE+NPLVDFVELPD L Y N+L GV+RGALEMV M E +++D L+GD E++++ ++++ + P Sbjct: 12 KKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLP 176
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: BET3_SCHPO (Transport protein particle subunit bet3 OS=Schizosaccharomyces pombe GN=bet3 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.042e-45 Identity = 93/178 (52.25%), Postives = 128/178 (71.91%), Query Frame = 2 Query: 143 GDAIFANVERVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELP-DTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYPYKDD 673 G+ ++ V++VNAELF LTYG+ V QL D+ E+VN++LD+MGYNIGIRLI++FLAK+ RC DFRET E +AK+GFK+FL + +S+ DG + L+DNPL +FVELP D Q L+Y NIL GVIRGALEM+ M + ++RD+LRGD+ E++V L + + EE P D+ Sbjct: 7 GEDVYKKVDKVNAELFVLTYGSIVAQLCKDMN-YEKVNEELDKMGYNIGIRLIEDFLAKTEWPRCADFRETGETVAKVGFKVFLNFSPIISSVSDDGNTFVLTLDDNPLAEFVELPADARQKLWYSNILCGVIRGALEMLQMDVDAVFLRDILRGDEHTEIRVHLKRILKEEIPPGDE 183
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: BET3_YEAST (Transport protein particle 22 kDa subunit OS=Saccharomyces cerevisiae GN=BET3 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.938e-40 Identity = 84/180 (46.67%), Postives = 125/180 (69.44%), Query Frame = 2 Query: 143 GDAIFAN-VERVNAELFTLTYGAAVRQLLTDLE-EVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELP-DTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEEYPYKDD 673 G+ I+ N E++N ELFTLTYG+ V QL D E + +VN L MGYNIG RLI++FLA++ + RC + +T+EV++K FK+FL +T ++NW + S+IL++NPL DFVELP D + L+Y NIL GV++G+LEMV + +V ++ D+LRGD E++VKL + + +E P +D Sbjct: 14 GEEIWKNKTEKINTELFTLTYGSIVAQLCQDYERDFNKVNDHLYSMGYNIGCRLIEDFLARTALPRCENLVKTSEVLSKCAFKIFLNITPNITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQLDCDVWFVSDILRGDSQTEIKVKLNRILKDEIPIGED 193
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPC3L_MOUSE (Trafficking protein particle complex subunit 3-like protein OS=Mus musculus GN=Bet3l PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.365e-37 Identity = 79/163 (48.47%), Postives = 113/163 (69.33%), Query Frame = 2 Query: 170 RVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFV-ELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEE 655 ++N +LF LTYGA V QL D E+ E+VNK LD+MGYNIG RL+++FLA+S V RC + E +IA++ FKM+LG+T +V+ ++ S+IL NPL +FV ELP L YCN+L G+IRGALEMV + VT+++D L+GD E+ + LK++ E+ Sbjct: 13 KINKDLFVLTYGALVAQLCKDYEKDEDVNKYLDKMGYNIGTRLVEDFLARSCVRRCHSYSEIINIIAQVAFKMYLGITPSVTCHNSSRNEFSLILHKNPLAEFVEELPAGRSALCYCNLLCGIIRGALEMVHLAANVTFLQDRLKGDSVTEIGITFLKKLDEK 175
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPC3L_HUMAN (Trafficking protein particle complex subunit 3-like protein OS=Homo sapiens GN=BET3L PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.971e-37 Identity = 79/163 (48.47%), Postives = 115/163 (70.55%), Query Frame = 2 Query: 170 RVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAKSNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFV-ELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWIRDVLRGDDAYELQVKLLKQVPEE 655 ++N +LF LTYGA V QL D E+ E+VN+ LD+MGY IG RL+++FLA+S V RC + E ++IA++ FKM+LG+T +V+ ++ S+ILE NPLV+FV ELP L YCN+L G+IRGALEMV + +VT+++D L+GD E+ + LK+ E+ Sbjct: 13 KINKDLFVLTYGALVAQLCKDYEKDEDVNQYLDKMGYGIGTRLVEDFLARSCVGRCHSYSEIIDIIAQVAFKMYLGITPSVTCNNSSKNEFSLILEKNPLVEFVEELPAGRSSLCYCNLLCGIIRGALEMVHLAADVTFLQDRLKGDSVTEIGITFLKKRDEK 175
BLAST of CK933038 vs. ExPASy Swiss-Prot
Match: TPPC3_CAEBR (Probable trafficking protein particle complex subunit 3 OS=Caenorhabditis briggsae GN=CBG10062 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28 Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 2 Query: 158 ANVERVNAELFTLTYGAAVRQLLTDLEEVEEVNKQLDQMGYNIGIRLIDEFLAK-SNVTRCVDFRETAEVIAKMGFKMFLGVTATVSNWDADGTCCSIILEDNPLVDFVELPD--TCQGLYYCNILSGVIRGALEMVSMK 568 A+ ++++AELF LTYGA V ++L D E+ ++V QLD+MG+N+G RL D+FLAK +NV RCVD R+ A+V+ + +LGV+AT S+W + I LE NPL + V++P GL Y +++G IRGALE V K Sbjct: 10 ADSKKMSAELFCLTYGAMVTEMLKDYEDPKDVTVQLDKMGFNMGTRLADDFLAKNANVPRCVDTRQIADVLCRNAIPCYLGVSATASSWSSGDREFIITLESNPLTELVQVPPNLVSAGLSYSQMIAGAIRGALEAVHFK 149 The following BLAST results are available for this feature:
BLAST of CK933038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933038 ID=CK933038; Name=CK933038; organism=Citrus sinensis; type=EST; length=816bpback to top |