CK933048

Overview
NameCK933048
Unique NameCK933048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length375
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3682 contig Csv1_Contig3682:245..619. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.083e-57
Identity = 112/124 (90.32%), Postives = 113/124 (91.13%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  274 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 221.476 bits (563), Expect = 1.083e-57
Identity = 112/124 (90.32%), Postives = 113/124 (91.13%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  274 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDL 397          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 3.151e-57
Identity = 111/124 (89.52%), Postives = 113/124 (91.13%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  274 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 2.042e-56
Identity = 109/124 (87.90%), Postives = 112/124 (90.32%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSLYEG+DFYS ITRARFEELN+DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  274 ERAKRTLSSTAQTTIEIDSLYEGVDFYSPITRARFEELNIDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 8.580e-55
Identity = 106/124 (85.48%), Postives = 110/124 (88.71%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSLY G DFYS ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKSTVH++VLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  274 ERAKRTLSSTAQTTIEIDSLYGGADFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHEIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.496e-54
Identity = 107/125 (85.60%), Postives = 112/125 (89.60%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQL-LQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSLYEG+DFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQ+ + +FFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  274 ERAKRTLSSTAQTTIEIDSLYEGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQVAMTNFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 398          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 5.561e-54
Identity = 104/124 (83.87%), Postives = 111/124 (89.52%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSLYEGIDFY+TITRARFEE+NMDLFRKCMEPVEKCLRDAK+DKS VH+VVLVGGSTRIPKV QLLQDFFNGKELCK+INPDE           ILSG+G+EKVQDL
Sbjct:  273 ERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSQVHEVVLVGGSTRIPKVHQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGQGDEKVQDL 396          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.370e-52
Identity = 102/124 (82.26%), Postives = 110/124 (88.71%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSSTAQTTIEIDSL++GIDFY+ ITRARFEELN+DLFRKCMEPVEKCLRDAKMDK+++ DVVLVGGSTRIPKVQQLL DFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  274 ERAKRTLSSTAQTTIEIDSLFDGIDFYAPITRARFEELNIDLFRKCMEPVEKCLRDAKMDKNSIDDVVLVGGSTRIPKVQQLLVDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.856e-50
Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 1
Query:    4 ERAKRTLSS-TAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 363
            ERAKRTLSS TAQTTIEIDSLYEG+DFY+TITRARFEELNMDLF+KCM+PVEKCLRD+K+DK+ VH+VVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNE+
Sbjct:  272 ERAKRTLSSSTAQTTIEIDSLYEGVDFYTTITRARFEELNMDLFKKCMDPVEKCLRDSKIDKAQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNER 392          
BLAST of CK933048 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 1.851e-49
Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 1
Query:    4 ERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 375
            ERAKRTLSS AQTTIE+DSL+EG+DF ++ITRARFEEL MDLFRKCM+PVEKCL DAKMDK TVHDVVLVGGSTRIPKVQQLLQDFFNGKEL K+INPDE           IL+GEG EKVQDL
Sbjct:  274 ERAKRTLSSAAQTTIELDSLFEGVDFATSITRARFEELCMDLFRKCMDPVEKCLHDAKMDKMTVHDVVLVGGSTRIPKVQQLLQDFFNGKELNKSINPDEAVAYGAAVQAAILTGEGGEKVQDL 397          
The following BLAST results are available for this feature:
BLAST of CK933048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SOLLC1.083e-5790.32Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_ARATH1.083e-5790.32Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP7C_PETHY3.151e-5789.52Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP7E_SPIOL2.042e-5687.90Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_ARATH8.580e-5585.48Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC2.496e-5485.60Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_SOYBN5.561e-5483.87Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP73_ARATH1.370e-5282.26Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_DAUCA2.856e-5080.99Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP70_CHLRE1.851e-4979.03Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_B11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933048 ID=CK933048; Name=CK933048; organism=Citrus sinensis; type=EST; length=375bp
GGGGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCCCAGACTACAATTGA
GATTGATTCTTTGTATGAGGGTATTGACTTCTACTCAACCATAACTCGTG
CCAGATTTGAGGAGTTGAACATGGATCTCTTCAGGAAGTGTATGGAGCCT
GTTGAGAAATGTTTGAGGGATGCTAAGATGGACAAGAGCACTGTCCACGA
TGTTGTGCTTGTGGGTGGTTCCACTAGGATTCCCAAGGTGCAACAGCTTT
TGCAAGACTTCTTCAATGGCAAGGAGCTCTGCAAGAACATTAATCCAGAT
GAGGCTGTTGCTTATGGTGCTGCTGTTCAGGCTGCCATCCTGAGCGGCGA
GGGCAATGAGAAGGTTCAGGATCTG
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