CK933092

Overview
NameCK933092
Unique NameCK933092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933092_ssr38 microsatellite CK933092_ssr38:38..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11725 contig Csv1_Contig11725:69..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: SMT2_ARATH (24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2)

HSP 1 Score: 450.669 bits (1158), Expect = 4.543e-126
Identity = 210/248 (84.68%), Postives = 236/248 (95.16%), Query Frame = 1
Query:   70 MDSLALFCTGALLAGGLYWFVCVLGPAEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKET-TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQG 810
            MDSL LF TGAL+A G+YWF+CVLGPAE+KGKRAV+LSGGSISAE+V+DNYK+YW FF+RPKE  T EKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSH+DATRLHEEMAVDLI VK G +ILDVGCGVGGPMRAIA+HSRANVVGITINEYQVNRARLHNKKAGLD+LCEVVCGNFL+MPF+DN FDGAYSIEATCHAP+LE+VYAE++RVLKPGS+YVSYEWVTT+K++AE+ EHV++IQG
Sbjct:    1 MDSLTLFFTGALVAVGIYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQVKPGQKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRARLHNKKAGLDALCEVVCGNFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLKPGSMYVSYEWVTTEKFKAEDDEHVEVIQG 248          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: SMT3B_ARATH (24-methylenesterol C-methyltransferase 3 OS=Arabidopsis thaliana GN=SMT3 PE=2 SV=1)

HSP 1 Score: 424.091 bits (1089), Expect = 4.553e-118
Identity = 193/248 (77.82%), Postives = 225/248 (90.73%), Query Frame = 1
Query:   70 MDSLALFCTGALLAGGLYWFVCVLGPAEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKET-TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQG 810
            MDS+AL+CT  L+AG +YWF+CVLGPAE+KGKRA +LSGGSISAE+V+DNY +YW FF++PKE  + EKVPDFVDTFYNLVTDIYEWGWGQSFHFSP +PGKS +DATR+HEEMAVDLI VK G +ILD GCGVGGPMRAIAAHS+A V GITINEYQV RA+LHNKKAGLDSLC VVCGNFLKMPF++N FDGAYSIEATCHAP+LE+VY+E+FRV+KPGSL+VSYEWVTT+KY  +++EH D+IQG
Sbjct:    1 MDSVALYCTAGLIAGAVYWFICVLGPAERKGKRASDLSGGSISAEKVKDNYNQYWSFFRKPKEIESAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPHVPGKSDKDATRIHEEMAVDLIKVKPGQKILDAGCGVGGPMRAIAAHSKAQVTGITINEYQVQRAKLHNKKAGLDSLCNVVCGNFLKMPFDENTFDGAYSIEATCHAPKLEEVYSEIFRVMKPGSLFVSYEWVTTEKYRDDDEEHKDVIQG 248          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: SMT2_ORYSJ (24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Smt2-1 PE=2 SV=2)

HSP 1 Score: 374.785 bits (961), Expect = 3.168e-103
Identity = 176/236 (74.58%), Postives = 197/236 (83.47%), Query Frame = 1
Query:  118 LYWFVCVLGPAEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKET-----TKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQG 810
            +YWFV V+G AE KGKRAV+L  GSI+ ++V+D Y +YW FF+RPKET     + EKVP FVDTFYNLVTDIYEWGWGQSFHFSPS+PG+SHR+ATR+HEE   DL+  K G R+LDVGCGVGGPMRAIAAHS +NVVGITINEYQVNRAR HN+KAGLDS CEVVCGNFL MPF D  FDGAYSIEATCHAP L+DVY EVFRVLKPG LYVSYEWVTT  Y A+N EHV+ I G
Sbjct:   18 VYWFVWVMGAAEVKGKRAVDLKMGSITNDKVKDKYTQYWSFFRRPKETATTEASAEKVPAFVDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHREATRVHEERVADLLQAKPGHRLLDVGCGVGGPMRAIAAHSGSNVVGITINEYQVNRARAHNRKAGLDSRCEVVCGNFLSMPFSDASFDGAYSIEATCHAPRLQDVYGEVFRVLKPGGLYVSYEWVTTSLYRADNPEHVEAIHG 253          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.188e-51
Identity = 93/206 (45.15%), Postives = 130/206 (63.11%), Query Frame = 1
Query:  184 GGSISAEEVE---DNYKEYWKFFKRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH 792
            GG I+ +EV+   D Y++Y  ++   +E  K    D V+ +Y+L T  YE+GWG+SFHF+    G+S R++ + HE      + VK G ++LDVGCG+GGP+R IA  S A+V G+  NEYQ+ R +  N+ AG+   C+ V  +F+KMPF DN FD  Y+IEATCHAP+    Y E++RVLKPG  +  YEW  TD YE  N  H
Sbjct:   14 GGKITKDEVKSAVDEYEKYHGYYGGKEEARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATH 219          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.440e-49
Identity = 89/209 (42.58%), Postives = 129/209 (61.72%), Query Frame = 1
Query:  184 GGSISAEEV---EDNYKEYWKFFKRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDI 801
            GG I   +V    + Y++Y  F    +E  K    D V+ +Y+L T  YE+GWG+SFHF+    G+S R++ + HE      + ++ G ++LDVGCG+GGP+R IA  S + V G+  NEYQ+ R +  N+ AG+D  C  V  +F+KMPF +N FD  Y+IEATCHAP+    Y E++RVLKPG  + +YEW  TD ++ +N EH  I
Sbjct:    8 GGKIDKSDVLTAVEKYEQYHVFHGGNEEERKANYTDMVNKYYDLATSFYEYGWGESFHFAQRWKGESLRESIKRHEHFLALQLGIQPGQKVLDVGCGIGGPLREIARFSNSVVTGLNNNEYQITRGKELNRLAGVDKTCNFVKADFMKMPFPENSFDAVYAIEATCHAPDAYGCYKEIYRVLKPGQCFAAYEWCMTDAFDPDNAEHQKI 216          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: ERG6_CANGA (Sterol 24-C-methyltransferase OS=Candida glabrata GN=ERG6 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.803e-48
Identity = 92/218 (42.20%), Postives = 131/218 (60.09%), Query Frame = 1
Query:  148 AEQKGKRAVNLSGGSISAEEVEDNYKEYWKFFKRPKETTKEKVPDFVD---TFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH 792
            AE +      LS    +  E    Y  +W   K  KE    ++ D+ +   ++YN+VTD YE+GWG SFHFS    G++ + A   HE+    +  +K GD +LDVGCGVGGP R IA  +  N++G+  N+YQ+ +A+ + KK  L    + V G+F+ M FE N FD  Y+IEATCHAP+LE VY E+++VLKPG  +  YEWV T+ Y+  N+EH
Sbjct:   22 AESRTGLTALLSKNRNAQREAVSKYLRHWDG-KTDKEAEDRRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGENFQAAMARHEQYLAYMAGIKKGDLVLDVGCGVGGPARTIARFTGCNIIGLNNNDYQIQKAKYYAKKYNLQDHMDFVKGDFMNMEFEPNSFDKVYAIEATCHAPKLEGVYGEIYKVLKPGGTFAVYEWVMTENYDENNEEH 238          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: ERG6_YEAST (Sterol 24-C-methyltransferase OS=Saccharomyces cerevisiae GN=ERG6 PE=1 SV=4)

HSP 1 Score: 189.889 bits (481), Expect = 1.445e-47
Identity = 91/207 (43.96%), Postives = 127/207 (61.35%), Query Frame = 1
Query:  178 LSGGSISAEEVEDNYKEYW--KFFKRPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEH 792
            +S  + + +E    Y   W  +  K  +E   E   +   ++YN+VTD YE+GWG SFHFS    G+S   +   HE        ++ GD +LDVGCGVGGP R IA  +  NV+G+  N+YQ+ +A+ + KK  L    + V G+F+KM FE+N FD  Y+IEATCHAP+LE VY+E+++VLKPG  +  YEWV TDKY+  N EH
Sbjct:   32 MSKNNSAQKEAVQKYLRNWDGRTDKDAEERRLEDYNEATHSYYNVVTDFYEYGWGSSFHFSRFYKGESFAASIARHEHYLAYKAGIQRGDLVLDVGCGVGGPAREIARFTGCNVIGLNNNDYQIAKAKYYAKKYNLSDQMDFVKGDFMKMDFEENTFDKVYAIEATCHAPKLEGVYSEIYKVLKPGGTFAVYEWVMTDKYDENNPEH 238          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: ERG6_MAGGR (Sterol 24-C-methyltransferase OS=Magnaporthe grisea GN=ERG6 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.220e-47
Identity = 96/204 (47.06%), Postives = 125/204 (61.27%), Query Frame = 1
Query:  214 DNYKEYWKFFKRPKETTK---EKVPDFVDT---FYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDS--LCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDI 801
            D Y  +W       ETTK   E+  D+      +YNLVTD YE+GWGQSFHF    PG++   A   +E      I +K G ++LD+GCGVGGP R IA  + AN+ GITINEYQV RAR + +  G  +    + V G+F+ +PFE   FD  YSIEAT HAP+LEDVY ++F VLKPG ++  YEWV TD Y+  +  H +I
Sbjct:   55 DQYFRHWDGKTAKTETTKVREERKADYATLTRQYYNLVTDFYEYGWGQSFHFCTFAPGETFASAITRYEHTLAHRIGIKKGMKVLDIGCGVGGPARQIAKFTGANITGITINEYQVERARRYAEMEGYGAGEQLKFVQGDFMALPFEKETFDAVYSIEATVHAPKLEDVYKQIFNVLKPGGIFGLYEWVMTDAYDENDPHHKEI 258          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: SMT1_DICDI (Probable cycloartenol-C-24-methyltransferase 1 OS=Dictyostelium discoideum GN=smt1 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.492e-47
Identity = 90/204 (44.12%), Postives = 127/204 (62.25%), Query Frame = 1
Query:  202 EEVEDNYKEYWKFFK----RPKETTKEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDI 801
            ++V+D    Y + FK    +  +  K      V+TFY+L TD YE+GWGQSFHF+     +S   +   HE      + +  G +++D+GCGVGGPMR IA  S ANVVG+  NEYQ+ R +  N+ AGL  LC  +  +F+ +P EDN +D AY IEATCHAP+L  +Y EVFR++KPG L+  YEW+ T+K+  E+   V+I
Sbjct:   30 DKVDDTLNGYKELFKGNDDKAIQARKNNYTHMVNTFYDLATDFYEFGWGQSFHFATRHKYESFEASIARHEMYMAHQLGLFPGMKVIDIGCGVGGPMRTIARFSGANVVGLNNNEYQIQRGKRLNESAGLSHLCSFIKADFMHVPVEDNTYDCAYQIEATCHAPDLVGLYKEVFRIVKPGGLFGGYEWIMTNKFNPEDPVEVNI 233          
BLAST of CK933092 vs. ExPASy Swiss-Prot
Match: ERG6_YARLI (Sterol 24-C-methyltransferase OS=Yarrowia lipolytica GN=ERG6 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.224e-46
Identity = 88/172 (51.16%), Postives = 114/172 (66.28%), Query Frame = 1
Query:  295 FYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIDVKAGDRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARLHNKKAGLDSLCEVVCGNFLKMPFEDNHFDGAYSIEATCHAPELEDVYAEVFRVLKPGSLYVSYEWVTTDKYEAENKEHVDIIQG 810
            +YNLVTD YE+GWG SFHFS    G++ R AT  HE      + ++ G ++LDVGCGVGGP R IA  + AN+VG+  N+YQV R   +++  G       V G+F++M F DN FD  Y+IEAT HAP LE VY+E+FRVLKPG ++  YEWV TD+Y+  N EH DI  G
Sbjct:   82 YYNLVTDFYEYGWGSSFHFSRYYKGEAFRQATARHEHYLAYKMGIQPGMKVLDVGCGVGGPAREIARFTGANIVGLNNNDYQVERGTHYSEVQGFGDQVTYVKGDFMQMDFPDNSFDAVYAIEATVHAPVLEGVYSEIFRVLKPGGVFGVYEWVMTDEYDESNPEHRDICYG 253          
The following BLAST results are available for this feature:
BLAST of CK933092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
SMT2_ARATH4.543e-12684.6824-methylenesterol C-methyltransferase 2 OS=Arabid... [more]
SMT3B_ARATH4.553e-11877.8224-methylenesterol C-methyltransferase 3 OS=Arabid... [more]
SMT2_ORYSJ3.168e-10374.5824-methylenesterol C-methyltransferase 2 OS=Oryza ... [more]
SMT1_ORYSJ8.188e-5145.15Cycloartenol-C-24-methyltransferase 1 OS=Oryza sat... [more]
SMT1_ARATH3.440e-4942.58Cycloartenol-C-24-methyltransferase OS=Arabidopsis... [more]
ERG6_CANGA3.803e-4842.20Sterol 24-C-methyltransferase OS=Candida glabrata ... [more]
ERG6_YEAST1.445e-4743.96Sterol 24-C-methyltransferase OS=Saccharomyces cer... [more]
ERG6_MAGGR3.220e-4747.06Sterol 24-C-methyltransferase OS=Magnaporthe grise... [more]
SMT1_DICDI5.492e-4744.12Probable cycloartenol-C-24-methyltransferase 1 OS=... [more]
ERG6_YARLI1.224e-4651.16Sterol 24-C-methyltransferase OS=Yarrowia lipolyti... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_F09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933092 ID=CK933092; Name=CK933092; organism=Citrus sinensis; type=EST; length=811bp
GGGGACACACACAACACATTCACGCTCTCGCACTCCATCTCTCTCTCCTT
CTAACTTTTTCAAGTCTCAATGGATTCTCTCGCTCTCTTTTGCACCGGCG
CTCTCCTTGCCGGTGGCCTCTACTGGTTTGTCTGCGTACTCGGCCCCGCC
GAACAAAAGGGCAAGCGCGCCGTCAACCTCTCCGGCGGCTCGATCTCCGC
CGAGGAAGTCGAAGACAATTATAAAGAGTACTGGAAGTTCTTTAAACGCC
CGAAGGAGACAACCAAGGAGAAGGTTCCAGATTTCGTCGACACGTTTTAC
AACTTAGTCACAGACATTTACGAGTGGGGGTGGGGCCAGTCCTTCCACTT
CTCCCCCTCTATCCCCGGGAAATCCCACCGTGACGCCACGCGCCTCCACG
AGGAGATGGCCGTCGATCTCATTGACGTCAAGGCCGGAGACCGCATTCTC
GACGTCGGATGCGGGGTCGGCGGTCCCATGCGTGCCATCGCCGCCCACTC
GCGTGCCAATGTCGTCGGCATCACAATCAACGAGTATCAAGTGAATCGTG
CTCGTCTGCACAACAAGAAGGCGGGATTAGATTCTCTCTGCGAAGTAGTA
TGCGGAAACTTCCTAAAGATGCCGTTTGAAGACAACCACTTCGACGGCGC
GTACTCAATCGAAGCGACATGTCACGCGCCGGAGCTGGAGGACGTGTACG
CTGAGGTCTTTAGGGTTTTGAAGCCCGGATCTCTATACGTGTCGTACGAG
TGGGTCACGACAGACAAGTACGAAGCGGAAAACAAAGAACACGTGGACAT
CATTCAGGGTA
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