CK933120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y1926_ARATH (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.100e-60 Identity = 114/154 (74.03%), Postives = 134/154 (87.01%), Query Frame = 3 Query: 45 PVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELVGNASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL SG PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ I+L+S+LVGNASKV+E+SR FELV+G+L +VV+M+T L+PHLKA+L KL Sbjct: 15 PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKLESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVKEISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 166
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y1995_MYCMM (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQS-----ELVGNASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRK 503 +HP + ++ LLGTW GQGSG YPTI F+Y EE+ F+H G KP + Y QKT + G P+HAE+GY R G +E+V+A +G+ E++ GTY+A VIE++ + A +V +SR F +V EL + ++M L L+ HL A LR+ Sbjct: 5 LHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGAPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVTALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y3360_MYCUA (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26 Identity = 65/157 (41.40%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQS-----ELVGNASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRK 503 +HP + ++ LLGTW GQG+G YPTI F+Y EE+ F+H G KP + Y QKT + G P+HAE+GY R G +E+V+A +G+ E++ GTY+A VIE++ + A +V +SR F +V EL + ++M L L+ HL A LR+ Sbjct: 5 LHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGTPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVTALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y2833_MYCPA (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis GN=MAP_2833c PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.825e-26 Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSE-----LVGNASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRK 503 +HP +A ++ LLGTW G+GSG YPTI FDY EE+ F+H G KP +AY QKT G+P+HAE+GY R G +E+V+A +G+ E++ G+Y +IE++ L +A +V ++R F + EL + VQM L+ HL AVL + Sbjct: 5 LHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKEVTALARWFRIDGDELSYSVQMGAVG-QPLQDHLAAVLHR 159
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y3611_MYCA1 (UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) GN=MAV_3611 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.898e-25 Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSE-----LVGNASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRK 503 +HP +A ++ LLGTW G+GSG YPTI FDY EE+ F+H G KP +AY QKT G+P+HAE+GY R G +E+V+A +G+ E++ G+Y +IE++ L A +V + R F + +L + VQM L+ HL AVL + Sbjct: 5 LHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAKEVTALGRWFRIDGDKLSYSVQMGAVG-QPLQDHLAAVLHR 159
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y449_MYCVP (UPF0678 fatty acid-binding protein-like protein Mvan_0449 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_0449 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.607e-24 Identity = 66/160 (41.25%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSELV-------GNASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 +HP +A ++ LLGTW G+GSG YPTI F Y EE+ F H GKP + Y Q+T G P+HAE+GY R + IE ++A TG+ E+Q+G A+ L+ ELV G+A +V +V R EL L + ++MA L+ HL AVLR++ Sbjct: 8 LHPDVAALAPLLGTWVGEGSGEYPTIEPFGYTEEITFGHV-GKPFLTYAQRTRAADDGRPLHAETGYLRASAPDRIEWILAHPTGITEIQEGQLTADGD--GLRMELVSSSIGRSGSAKEVTDVGRSIELRGDTLTYTLRMAAVG-QPLQHHLSAVLRRV 163
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y6574_MYCS2 (UPF0678 fatty acid-binding protein-like protein MSMEG_6574 OS=Mycobacterium smegmatis GN=MSMEG_6574 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24 Identity = 64/160 (40.00%), Postives = 95/160 (59.38%), Query Frame = 3 Query: 42 VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWR-PNPDGSIEVVIAQSTGLVEVQKG--TYNAEEKVIELQSELVG---NASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRK 503 + +HP IAP++ LLGTW G G+G YPTI +F+Y EE+ F H GKP + Y Q+T G P+HAE GY R P PD +E V+A TG+ E+Q+G T + +++++ +G +A V ++R F + EL + +QM L+ HL A LR+ Sbjct: 2 IDLHPNIAPLAPLLGTWAGPGAGEYPTIQSFEYLEEITFGHV-GKPFLTYQQRTKARDDGRPLHAEVGYIRVPAPD-RVEWVLAHPTGITEIQEGTLTVGGDRITMDVKATTIGLTASAKNVTALARSFRITGDELTYTLQMGAVG-QPLQHHLAATLRR 158
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y421_MYCSS (UPF0678 fatty acid-binding protein-like protein Mmcs_0421 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_0421 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVI--ELQSELVG---NASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 VHP + ++ LLGTW G+GSG YPTI FDY EE+ F H+ GKP + Y Q+T G P+HAE+GY R ++E ++A TG+ E+Q+G A+ + +L S +G +A +V V R ++ L + ++MA L+ HL AVL ++ Sbjct: 18 VHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHT-GKPFLTYVQRTRAADDGRPLHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVG-RPLQHHLSAVLHRV 173
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y408_MYCSJ (UPF0678 fatty acid-binding protein-like protein Mjls_0408 OS=Mycobacterium sp. (strain JLS) GN=Mjls_0408 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 48 VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVI--ELQSELVG---NASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRKL 506 VHP + ++ LLGTW G+GSG YPTI FDY EE+ F H+ GKP + Y Q+T G P+HAE+GY R ++E ++A TG+ E+Q+G A+ + +L S +G +A +V V R ++ L + ++MA L+ HL AVL ++ Sbjct: 18 VHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHT-GKPFLTYVQRTRAADDGRPLHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVMAVGRSMQISGDTLTYTLRMAAVG-RPLQHHLSAVLHRV 173
BLAST of CK933120 vs. ExPASy Swiss-Prot
Match: Y2745_MYCTA (UPF0678 fatty acid-binding protein-like protein MRA_2745 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2745 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23 Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 54 PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIELQSE--------LVGNASKVREVSRVFELVNGELRFVVQMATNHLTSLRPHLKAVLRK 503 PA+ +S LLG+W G+G+G YPTI F+Y EE+ F H G KP + YTQ+T + G+P+H+E+GY R G +E+V+A +G+ E++ GTY+ VIEL+ L A +V + R + + EL + +QM L+ HL AVL + Sbjct: 7 PALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162 The following BLAST results are available for this feature:
BLAST of CK933120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933120 ID=CK933120; Name=CK933120; organism=Citrus sinensis; type=EST; length=673bpback to top |