CK933126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933126 vs. ExPASy Swiss-Prot
Match: T112A_ARATH (TRM112-like protein At1g22270 OS=Arabidopsis thaliana GN=At1g22270 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.486e-34 Identity = 75/124 (60.48%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 74 MRLLTHNMLSSNIKGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGY-XXXXXXXXXXXXXXXXXFLMKFXXXXXXXXXXXGALVCPETGRKFPVNKGIPNMLLHEDEV 442 MRL+THNMLS NIKGV +GFPL IE VIEK+VDFNPDF++++F KIEW+ALV+ +RSMGY FL K GALVCPETGRKFPVNKGIPNMLLHEDEV Sbjct: 1 MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSMGYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHEDEV 124
BLAST of CK933126 vs. ExPASy Swiss-Prot
Match: T112B_ARATH (TRM112-like protein At1g78190 OS=Arabidopsis thaliana GN=At1g78190 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.629e-31 Identity = 71/124 (57.26%), Postives = 80/124 (64.52%), Query Frame = 2 Query: 74 MRLLTHNMLSSNIKGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGY-XXXXXXXXXXXXXXXXXFLMKFXXXXXXXXXXXGALVCPETGRKFPVNKGIPNMLLHEDEV 442 MRL+ HNMLS NIKGV N FPL IE EKV K+VDFNPDFL+ +F KI+W+ALV +RSM Y FL KF G+LVCPETGRKF V+KGIPNMLLHEDEV Sbjct: 1 MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSMEYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLHEDEV 124
BLAST of CK933126 vs. ExPASy Swiss-Prot
Match: TR112_MOUSE (tRNA methyltransferase 112 homolog OS=Mus musculus GN=Trmt112 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.034e-19 Identity = 50/123 (40.65%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 74 MRLLTHNMLSSNIKGVAN-GFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYXXXXXXXXXXXXXXXXXFLMKFXXXXXXXXXXXGALVCPETGRKFPVNKGIPNMLLHEDE 439 M+LLTHN+LSS+++GV GFPL ++ +V V+FNP+F+ + PK+EW ALVQA+ ++ FL K G L CPE+GR FP+++GIPNMLL+++E Sbjct: 1 MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADTLN-LAEVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNMLLNDEE 122
BLAST of CK933126 vs. ExPASy Swiss-Prot
Match: TR112_BOVIN (tRNA methyltransferase 112 homolog OS=Bos taurus GN=TRMT112 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.350e-19 Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 2 Query: 74 MRLLTHNMLSSNIKGVA-NGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYXXXXXXXXXXXXXXXXXFLMKFXXXXXXXXXXXGALVCPETGRKFPVNKGIPNMLLHEDE 439 MRLLTHN+LSS+++GV GFPL ++ +V V+FNPDF+ + PK+EW AL++A+ + + FL K G L CPE+GR FP+++GIPNMLL ++E Sbjct: 1 MRLLTHNLLSSHVRGVGPRGFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADHL-HLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNMLLSDEE 122
BLAST of CK933126 vs. ExPASy Swiss-Prot
Match: TR112_HUMAN (tRNA methyltransferase 112 homolog OS=Homo sapiens GN=TRMT112 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.263e-17 Identity = 47/123 (38.21%), Postives = 71/123 (57.72%), Query Frame = 2 Query: 74 MRLLTHNMLSSNIKGVAN-GFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYXXXXXXXXXXXXXXXXXFLMKFXXXXXXXXXXXGALVCPETGRKFPVNKGIPNMLLHEDE 439 M+LLTHN+LSS+++GV + GFPL ++ +V V+FNP+F+ + PK+EW A ++A+ ++ FL G L CPE+GR FP+++GIPNMLL E+E Sbjct: 1 MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNLRLIQVPKGPVEGYEENEE-FLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSEEE 122
BLAST of CK933126 vs. ExPASy Swiss-Prot
Match: TR112_DROME (TRM112-like protein OS=Drosophila melanogaster GN=CG12975 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.383e-16 Identity = 48/124 (38.71%), Postives = 65/124 (52.42%), Query Frame = 2 Query: 74 MRLLTHNMLSS-NIKGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYXXXXXXXXXXXXXXXXXFLMKFXXXXXXXXXXXGALVCPETGRKFPVNKGIPNMLLHEDEV 442 M+L T+N L+S IKGV GFPL + + K + +FNP F++ I PK++W A+ A++ L K G L CPETGR FP++ GIPNMLL+EDEV Sbjct: 1 MKLSTYNFLTSVAIKGVKVGFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENELLLQKLHHLLFEIDVLEGQLECPETGRVFPISDGIPNMLLNEDEV 124
BLAST of CK933126 vs. ExPASy Swiss-Prot
Match: TR112_DICDI (TRM112-like protein OS=Dictyostelium discoideum GN=DDB_G0285489 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.804e-14 Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 2 Query: 74 MRLLTHNMLSSNIKG-VANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYXXXXXXXXXXXXXXXXXFLMKFXXXXXXXXXXXGALVCPETGRKFPVNKGIPNMLLHEDEV 442 M++LTHNM++ K + GFPL +E + I + +FN +F KNI+PK++W + + S + + FL G+L CP R +P++KGIPNMLL EDE+ Sbjct: 1 MKILTHNMMACTKKQCMGKGFPLKVESTEQIVLEQEFNYEFTKNIYPKLDWLGIAEIS--IKFNIPIQLDTTKHSLEDEEFLKTLHNLLCNLKVITGSLTCPNCQRVYPIDKGIPNMLLREDEI 122 The following BLAST results are available for this feature:
BLAST of CK933126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933126 ID=CK933126; Name=CK933126; organism=Citrus sinensis; type=EST; length=622bpback to top |