CK933289

Overview
NameCK933289
Unique NameCK933289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13133 contig Csv1_Contig13133:1..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.942e-66
Identity = 127/169 (75.15%), Postives = 136/169 (80.47%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 511
            K+E LKEKFEGLCKV+KD LG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSL++PNTFGNRIHRMLKLGLSI+E++GDADADMP LED   DAEGSKMEEVD
Sbjct:  531 KQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD 699          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.626e-64
Identity = 129/170 (75.88%), Postives = 137/170 (80.59%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 511
            KKE LKEKFEGLCKVIKD LG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSLD+PNTFG+RIHRMLKLGLSI ++DA +ADA+MPPLED A DAEGSKMEEVD
Sbjct:  531 KKEELKEKFEGLCKVIKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDAVEADAEMPPLEDDA-DAEGSKMEEVD 699          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 1.346e-63
Identity = 128/170 (75.29%), Postives = 135/170 (79.41%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-EEDAGDADADMPPLEDAADDAEGSKMEEVD 511
            KKE LKEKFEGLCKVIKD LG               PCCLVTGEYGWTANMERIMKAQALRD+SM GYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSLD+PNTFG+RIHRMLKLGLSI ++D  +ADADMPPLED A DAEGSKMEEVD
Sbjct:  531 KKEELKEKFEGLCKVIKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDDVVEADADMPPLEDDA-DAEGSKMEEVD 699          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.329e-62
Identity = 126/170 (74.12%), Postives = 132/170 (77.65%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 511
            +KE LKEKFEGLCKVIK+ LG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD           TSGFSLDDPNTFG+RIHRMLKLGLSI+ED   +AD DMPPLE   DDA  SKMEEVD
Sbjct:  533 RKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE---DDAGESKMEEVD 699          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.329e-62
Identity = 126/170 (74.12%), Postives = 132/170 (77.65%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 511
            +KE LKEKFEGLCKVIK+ LG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IMEELRKRADADKNDKSVKD           TSGFSLDDPNTFG+RIHRMLKLGLSI+ED   +AD DMPPLE   DDA  SKMEEVD
Sbjct:  533 RKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLE---DDAGESKMEEVD 699          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.806e-61
Identity = 124/170 (72.94%), Postives = 133/170 (78.24%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 511
            ++E LKEKFEGLCKVIK+ LG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSL+DPNTFG RIHRMLKLGLSI+ED + +ADADMPPLE   DDA  SKMEEVD
Sbjct:  533 RQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE---DDAGESKMEEVD 699          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.806e-61
Identity = 124/170 (72.94%), Postives = 133/170 (78.24%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 511
            ++E LKEKFEGLCKVIK+ LG               PCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSSKKTMEINPEN IM+ELRKRADADKNDKSVKD           TSGFSL+DPNTFG RIHRMLKLGLSI+ED + +ADADMPPLE   DDA  SKMEEVD
Sbjct:  533 RQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLEDPNTFGTRIHRMLKLGLSIDEDESAEADADMPPLE---DDAGESKMEEVD 699          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.593e-56
Identity = 115/169 (68.05%), Postives = 125/169 (73.96%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 511
            K+E  K+ FE LCK+IKD LG               PCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD           TSGFSLDDPNTFG RIHRMLKLGLSI+E+    DADMP LE+ A   E SKMEEVD
Sbjct:  537 KREEKKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGARIHRMLKLGLSIDEEEAGDDADMPALEEEA--GEESKMEEVD 703          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.033e-55
Identity = 115/170 (67.65%), Postives = 128/170 (75.29%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED-AGDADADMPPLEDAADDAEGSKMEEVD 511
            ++E  K++FE LCKVIKD LG               PCCLVTGEYGWTANMERIMKAQALRD+SM+ YMSSKKTMEINP+N IMEELRKRA+AD+NDKSVKD           TSGFSLDDPNTF  RIHRMLKLGL+I+ED A D DADMP L++ A  AE SKMEEVD
Sbjct:  548 RREERKKRFEELCKVIKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSAYMSSKKTMEINPDNGIMEELRKRAEADRNDKSVKDLVLLLFETALLTSGFSLDDPNTFAARIHRMLKLGLNIDEDAAADEDADMPALDEGA--AEESKMEEVD 715          
BLAST of CK933289 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 6.695e-55
Identity = 114/170 (67.06%), Postives = 125/170 (73.53%), Query Frame = 2
Query:    5 KKETLKEKFEGLCKVIKDGLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAG-DADADMPPLEDAADDAEGSKMEEVD 511
            K+E  K+ FE LCK IK+ LG               PCCLVTGEYGWTANMERIMKAQALRD+SM+GYMSSKKTMEINP+N IMEELRKRA+ADKNDKSVKD           TSGFSLD+PNTF  RIHRMLKLGLSI+ED   + D DMP LE+  D AE SKMEEVD
Sbjct:  533 KREEKKKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLYETALLTSGFSLDEPNTFAARIHRMLKLGLSIDEDENVEEDGDMPELEE--DAAEESKMEEVD 700          
The following BLAST results are available for this feature:
BLAST of CK933289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
HSP80_SOLLC4.942e-6675.15Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP82_ARATH4.626e-6475.88Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP83_ARATH1.346e-6375.29Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP81_ORYSJ4.329e-6274.12Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI4.329e-6274.12Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ2.806e-6172.94Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.806e-6172.94Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP83_IPONI1.593e-5668.05Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE1.033e-5567.65Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP81_ARATH6.695e-5567.06Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_D06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933289 ID=CK933289; Name=CK933289; organism=Citrus sinensis; type=EST; length=781bp
GGGGAAGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGCAAGGTGA
TCAAGGATGGTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTCTGACCGT
GTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGC
CAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAACAGCATGG
CTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGAGAACCCC
ATCATGGAGGAGCTCAGGAAGAGGGCTGATGCTGACAAGAATGACAAGTC
TGTGAAGGACCTTGTCCTTCTGCTCTTTGAGACTGCTCTCCTCACTTCTG
GTTTCAGCCTTGATGACCCTAACACTTTCGGCAACAGAATCCACAGGATG
TTGAAACTCGGGCTGAGCATCGAGGAGGATGCTGGTGATGCTGATGCTGA
CATGCCACCATTGGAGGATGCTGCTGACGATGCTGAGGGCAGCAAGATGG
AGGAAGTTGATTAAGAAGCTATAATAGTCTGCTATAGTAGTCTTTTTTCA
TGAAACTCTTTTAACTAGGTAGTTTCTTTTTGTTATGCGTTCTGTGGTGG
TAGTACTGTGGGAGTAGTGCTTTTATATTTTTATTTTCCCTCTTTGGTGG
AGGTTTTGTTTTATTGTTTTGCAAATGCTTAAAAAGTATGCTGTTTCCGA
ATCTATCTTATTTGATATAGTTATCTTAATGCGGCCAGTTTATATTCTTG
GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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