CK933290

Overview
NameCK933290
Unique NameCK933290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK933290 vs. ExPASy Swiss-Prot
Match: Y1583_ARATH (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23
Identity = 55/123 (44.72%), Postives = 74/123 (60.16%), Query Frame = 1 
Query:  178 KAFKLLLWCGCLTFASLLGQGKGEKCSKYSPTLQQTQVGFGSPPTFTARVHNNCPMCPVINIHLKCGNFSQALVNPRLLKVISYN--NCVVNSGFPLSPLQTFSFNYSHP-KYVMQPATWSFQ 537
            K  K LLW         +G G   +     P ++QTQV +     F   V N CPMCP+IN+ LKC  F Q+LV+P  L+V+S +  NCVVN G PLSP+QT SFNYS+  ++ ++P +WSFQ
Sbjct:    3 KPLKFLLWSSLALLLLQIGSGAICEGKSSEPAVRQTQVKWREGKKFRVEVMNKCPMCPIINLRLKCQGFPQSLVDPTFLRVLSSSAGNCVVNDGLPLSPMQTLSFNYSNTHQFALRPLSWSFQ 125
The following BLAST results are available for this feature:
BLAST of CK933290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1583_ARATH1.079e-2344.72Uncharacterized protein At1g05835 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004287_D07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933290 ID=CK933290; Name=CK933290; organism=Citrus sinensis; type=EST; length=681bp
GGGGACAAGCATGTGACTCTTGATAAATGATAATTGTTCATTCTTTCCAC
AGCCACCACAAACCACACAATATTAGTTTCCTTTTAGTGCCTATATATAA
TCAATCTACAGACATACATACACTCACAGGCAATGCACAATTGTATGCAG
ATCAATTGTGTAAATATGCAGAGCCACAAAGCTTTCAAATTACTTCTGTG
GTGTGGTTGCCTCACATTTGCTTCTCTCCTAGGCCAAGGTAAGGGAGAGA
AATGCAGCAAATATTCTCCAACACTGCAACAAACTCAGGTGGGTTTCGGC
AGTCCTCCAACATTTACGGCTCGAGTGCATAACAACTGCCCTATGTGTCC
AGTTATTAATATCCACTTGAAGTGTGGGAACTTTTCTCAGGCTCTAGTCA
ATCCCAGACTGCTCAAGGTGATTTCATACAACAATTGTGTTGTTAACAGT
GGCTTCCCTCTGTCACCACTGCAAACATTTTCCTTCAATTATTCACATCC
CAAGTATGTCATGCAACCCGCTACTTGGTCCTTCCAGTGCGAGTGATGCC
TCATACTCTTCTGTATTTTCTTATGTTTAATTTGCCTCTAGTTTGAACCA
AGCTTAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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