CK933293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP16_ARATH (Putative clathrin assembly protein At4g40080 OS=Arabidopsis thaliana GN=At4g40080 PE=2 SV=2) HSP 1 Score: 295.049 bits (754), Expect = 3.730e-79 Identity = 153/264 (57.95%), Postives = 187/264 (70.83%), Query Frame = 1 Query: 121 MGRL---ANLMGIIKDKVSQSKAAIIS---KPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLXXXXXXVEMDKEEEKVSALVNIXXXXXXXXXXXXXXQMCKTPDCLHVRGNPLVDDIMGLVGEDYLSAINEVSIRVSEFNNRLGCLSLGDSVELACAL 894 MGR+ A+L+G IKDK SQSKAA++S K KTL+ HLS+LRATTHDPSTPP + L +LS G SRATAS+ +E++M+RL TT DA VA+KSLI +HHIVKHG FILQDQLSV+P++GGRNYLKLS FRD +PL WELSSWVRWYALYLEHLLSTSR++GFF+ + ++ EE VS+L N + CK PD G L D I LVGEDY+S+INE+ R +EF R LS GD++EL CAL Sbjct: 1 MGRITSFADLIGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAVILSAGTGSRATASSAVESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPASGGRNYLKLSAFRDEKSPLMWELSSWVRWYALYLEHLLSTSRIMGFFISSTSSTIHKEEYEEMVSSLTNSDLLREIDALVGLLEEACKIPDLPFSGGKSLADKITQLVGEDYVSSINELYTRFNEFKERSNTLSFGDTIELVCAL 264
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP17_ARATH (Putative clathrin assembly protein At5g10410 OS=Arabidopsis thaliana GN=At5g10410 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 8.161e-26 Identity = 80/256 (31.25%), Postives = 126/256 (49.22%), Query Frame = 1 Query: 124 GRLANLMGIIKDKVSQSKAAII---SKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAG-GRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLXXXXXXVEMDKEEEKVSALVNIXXXXXXXXXXXXXXQMCKTPDCLHVRGNPLVDDIMGLVGEDYLSAINEVSIRVSEFNNRL---GCLSLGD 870 G +++G KDK S KA ++ +HL+LL++TT P+ PP+ ++ ++S+ +S A A+ A + RL+ T +A VA KSLI +H ++K + G GRN LKL+ F D ++ LT ELS W+RWY YL+ L +VLG F + +E+++VS+ +C P+ + N +VD+I LV EDY + V +R+ RL G +GD Sbjct: 3 GLKTHIIGKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRTPNKPPNSDYVSAVISYSNSRYAPAA--FSAALWRLRVTKNAIVATKSLIVIHKLIKSSR-------DKFEGLGHGRNNLKLNEFSDKSSNLTLELSQWIRWYGQYLDRLSWVPKVLGSFPNLLVNPKDKVEEKDRVSSYQTGYIIRQTDSLVSFFEHICTRPEIPPMFQNKIVDEIRELVIEDYFKIVRLVMVRLQVLFERLIKPGVKPIGD 249
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP18_ARATH (Putative clathrin assembly protein At5g65370 OS=Arabidopsis thaliana GN=At5g65370 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.191e-22 Identity = 80/255 (31.37%), Postives = 126/255 (49.41%), Query Frame = 1 Query: 121 MGRLANLMGIIKDKVSQSKAAII---SKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVK-----HGSFILQDQLS----VYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGFFLXXXXXXVEMDKEEEKVSALVNIXXXXXXXXXXXXXXQMCKTPDCLHVRGNPLVDDIMGLVGEDYLSAINEVSIRVSEFNNRL 849 MG+LA L GI+KD+ SQ K ++ S T+ L+LL+AT+H + PP K +T L S ++A++ RL+ T D VA K LI +H +VK +G L++ ++ +Y + GG N LKL++ N++ T EL+ WV+WY YL+ LS + VLG + E ++VS+ + P + N +V ++ L+ +DY SAI + IR E N R+ Sbjct: 1 MGKLATLNGILKDEASQMKLNVVHLCSSVNAKTIDLALLKATSHTSNNPPSDKYVTFLQST--IDTCYGPDTVDAILHRLRVTTDVCVAAKCLILLHKMVKSESGYNGEDSLRNNINHRTLIY-TQGGSN-LKLNDLNVNSSRFTRELTPWVQWYKQYLDCYLSIAEVLGITPNIKEKNEDKRLETQRVSSYPMDCILKQIDFLVELFEHISDRPKAPQSKLNKIVIEMTELMVQDYFSAIRLMRIRFEELNVRV 251
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP6_ARATH (Putative clathrin assembly protein At4g25940 OS=Arabidopsis thaliana GN=At4g25940 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 9.044e-17 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 1 Query: 142 MGIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDP--KRLTTLLSFGHSSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 597 +G IKD + S A + S+ K L + ++++AT H S P + +R+ + S RA + I AL RL T + VAIK LI +H ++ G +++L Y G + L++SNF+D+T+PL W+ S+W+R YAL+LE L RVL + Sbjct: 11 VGAIKDSTTVSIAKVNSEFKDLDV--AIVKATNHVESAPKERHIRRIFSATSVVQP-RADVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSHRG--HILRISNFKDDTSPLAWDCSAWIRTYALFLEERLECYRVLKY 159
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP7_ARATH (Putative clathrin assembly protein At5g57200 OS=Arabidopsis thaliana GN=At5g57200 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.862e-16 Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 1 Query: 145 GIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGH--SSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 597 G +KD + A + S+ K L + ++++AT H S PP + + + S RA + I AL RL T + VA+K LI +H ++ G +++L Y R+ L++SNF+D+T+PL W+ S+WVR YAL+LE L RVL + Sbjct: 12 GALKDTTTVGLAKVNSEFKDLDI--AIVKATNHVES-PPKERHVRKIFSATSVIQPRADVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHR--RHILRISNFKDDTSPLAWDCSAWVRTYALFLEERLECYRVLKY 159
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP8_ARATH (Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.228e-15 Identity = 50/153 (32.68%), Postives = 84/153 (54.90%), Query Frame = 1 Query: 145 GIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATASAV--IEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 597 G +KD + S+ L +++++AT H PP + L + + +RA A I AL RL T + +VA+K+LI +H +++ G +++L + G L+LSNF+D+++P+ W+ S+WVR YAL+LE L RVL + Sbjct: 12 GALKDSTKVGLVRVNSE--YADLDVAIVKATNH-VECPPKDRHLRKIFAATSVTRARADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRG--RILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKY 159
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP9_ARATH (Putative clathrin assembly protein At1g14910 OS=Arabidopsis thaliana GN=At1g14910 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 7.166e-14 Identity = 43/130 (33.08%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 211 LHLSLLRATTHDPSTPPDPK-RLTTLLSFGHSSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 597 L +++++AT H P D R L + RA + I AL RL T + +VA+K+L+ +H +++ G +++L + G +++SNF+D+++P+ W+ S WVR YAL+LE L RVL + Sbjct: 32 LDVAIVKATNHVECPPKDRHLRKIFLATSAIRPRADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKG--RIMQISNFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKY 159
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP1_ARATH (Probable clathrin assembly protein At4g32285 OS=Arabidopsis thaliana GN=At4g32285 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.166e-14 Identity = 46/144 (31.94%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 142 MGIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLL 573 +G++KD+ S A + S L +++++AT+HD D K + +LS SR A + ++ RL+ T D VA+K+L+ VH ++ G + Q+++ +Y + G L +S+FRD +W+ S++VR YA YL+ L Sbjct: 9 IGVVKDQTSIGIAKVASNMAP-DLEVAIVKATSHDDDQSSD-KYIREILSLTSLSRGYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEI-LYATRRGTRILNMSDFRDEAHSSSWDHSAFVRTYASYLDQRL 149
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP10_ARATH (Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana GN=At5g35200 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.596e-13 Identity = 52/159 (32.70%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 130 LANLMGIIKDKVSQSKAAIISKPKTLTLHLSLLRATTHDPSTPPDPKRLTTLLSFGHSS---RATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLLSTSRVLGF 597 L +G IKD + S A + S K L + ++++AT H P +R + S+ RA + I AL RL TH+ +VA+K+LI +H ++ +++ Y S + L +S+F+D++ P W S+WVR+YAL+LE L RVL + Sbjct: 11 LRRYLGAIKDTTTVSLAKVNSDYKELDI--AIVKATNHVER--PSKERYIRAIFMAISATRPRADVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINY-SRSRSHMLNMSHFKDDSGPNAWAYSAWVRFYALFLEERLECFRVLKY 164
BLAST of CK933293 vs. ExPASy Swiss-Prot
Match: CAP3_ARATH (Putative clathrin assembly protein At4g02650 OS=Arabidopsis thaliana GN=At4g02650 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.085e-13 Identity = 47/154 (30.52%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 115 LNMGRLANLMGIIKDKVSQSKAAIISKPKTLT-LHLSLLRATTHDPSTPPDPKRLTTLLSFGHSSRATASAVIEALMDRLQTTHDASVAIKSLIAVHHIVKHGSFILQDQLSVYPSAGGRNYLKLSNFRDNTTPLTWELSSWVRWYALYLEHLL 573 + +L +G +KD+ S A + + +LT L +++++AT HD P + K + +L SR SA + L RL T + SVA+K+LI + ++ G + ++ + + G L +S+FRD + +W+ S++VR YALYL+ L Sbjct: 1 MGSSKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHD-DYPAEDKYIREILCLTSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEI-FFATRRGTRLLNMSDFRDASQSDSWDYSAFVRTYALYLDERL 152 The following BLAST results are available for this feature:
BLAST of CK933293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933293 ID=CK933293; Name=CK933293; organism=Citrus sinensis; type=EST; length=894bpback to top |